Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV2A0A0B4J234 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRAV2A0A0B4J234 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.3■□□□□ 0.36
TRAV2A0A0B4J234 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV2A0A0B4J234 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV2A0A0B4J234 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRAV2A0A0B4J234 Z92544.1-202ENST00000571933 1220 ntBASIC17.3■□□□□ 0.36
TRAV2A0A0B4J234 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV2A0A0B4J234 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV2A0A0B4J234 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV2A0A0B4J234 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV2A0A0B4J234 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
TRAV2A0A0B4J234 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV2A0A0B4J234 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV2A0A0B4J234 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV2A0A0B4J234 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TRAV2A0A0B4J234 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV2A0A0B4J234 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV2A0A0B4J234 LINC01124-201ENST00000409786 2117 ntBASIC17.29■□□□□ 0.36
TRAV2A0A0B4J234 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV2A0A0B4J234 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV2A0A0B4J234 BX664725.1-201ENST00000438252 379 ntBASIC17.29■□□□□ 0.36
TRAV2A0A0B4J234 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TRAV2A0A0B4J234 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.29■□□□□ 0.36
TRAV2A0A0B4J234 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV2A0A0B4J234 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
TRAV2A0A0B4J234 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV2A0A0B4J234 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV2A0A0B4J234 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV2A0A0B4J234 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
TRAV2A0A0B4J234 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV2A0A0B4J234 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV2A0A0B4J234 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV2A0A0B4J234 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV2A0A0B4J234 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV2A0A0B4J234 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV2A0A0B4J234 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV2A0A0B4J234 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRAV2A0A0B4J234 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
TRAV2A0A0B4J234 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV2A0A0B4J234 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV2A0A0B4J234 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAV2A0A0B4J234 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRAV2A0A0B4J234 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV2A0A0B4J234 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV2A0A0B4J234 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRAV2A0A0B4J234 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV2A0A0B4J234 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAV2A0A0B4J234 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TRAV2A0A0B4J234 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV2A0A0B4J234 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV2A0A0B4J234 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV2A0A0B4J234 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV2A0A0B4J234 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV2A0A0B4J234 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV2A0A0B4J234 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV2A0A0B4J234 AC021242.3-201ENST00000607598 1377 ntBASIC17.26■□□□□ 0.35
TRAV2A0A0B4J234 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV2A0A0B4J234 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV2A0A0B4J234 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV2A0A0B4J234 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV2A0A0B4J234 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV2A0A0B4J234 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV2A0A0B4J234 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV2A0A0B4J234 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV2A0A0B4J234 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAV2A0A0B4J234 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV2A0A0B4J234 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.25■□□□□ 0.35
TRAV2A0A0B4J234 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV2A0A0B4J234 AC131274.2-201ENST00000580697 1507 ntBASIC17.25■□□□□ 0.35
TRAV2A0A0B4J234 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV2A0A0B4J234 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV2A0A0B4J234 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV2A0A0B4J234 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV2A0A0B4J234 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV2A0A0B4J234 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRAV2A0A0B4J234 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRAV2A0A0B4J234 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV2A0A0B4J234 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV2A0A0B4J234 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV2A0A0B4J234 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV2A0A0B4J234 AC004448.1-201ENST00000458332 883 ntBASIC17.24■□□□□ 0.35
TRAV2A0A0B4J234 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.24■□□□□ 0.35
TRAV2A0A0B4J234 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
TRAV2A0A0B4J234 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.24■□□□□ 0.35
TRAV2A0A0B4J234 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRAV2A0A0B4J234 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV2A0A0B4J234 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV2A0A0B4J234 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRAV2A0A0B4J234 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV2A0A0B4J234 AC093323.1-202ENST00000635031 2045 ntBASIC17.23■□□□□ 0.35
TRAV2A0A0B4J234 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV2A0A0B4J234 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV2A0A0B4J234 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV2A0A0B4J234 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV2A0A0B4J234 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV2A0A0B4J234 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV2A0A0B4J234 KRT125P-201ENST00000546827 989 ntBASIC17.23■□□□□ 0.35
TRAV2A0A0B4J234 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV2A0A0B4J234 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms