Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 AC068418.2-201ENST00000577309 3703 ntBASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL4A3BPQ9Y5P4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 AL157414.3-201ENST00000624276 1954 ntBASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 AL138709.1-201ENST00000614840 1693 ntBASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 LILRP1-201ENST00000444199 1370 ntBASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 AL139094.1-201ENST00000405549 1188 ntBASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 BNIP3P42-201ENST00000454982 569 ntBASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 BNIP3P29-201ENST00000598302 571 ntBASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 AC011447.5-201ENST00000616168 564 ntBASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 REXO1L5P-201ENST00000622260 2098 ntBASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL4A3BPQ9Y5P4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms