Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFT52Q9Y366 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFT52Q9Y366 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
IFT52Q9Y366 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.26□□□□□ -0.13
IFT52Q9Y366 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFT52Q9Y366 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.26□□□□□ -0.13
IFT52Q9Y366 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFT52Q9Y366 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFT52Q9Y366 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.26□□□□□ -0.13
IFT52Q9Y366 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
IFT52Q9Y366 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.26□□□□□ -0.13
IFT52Q9Y366 AC097493.3-201ENST00000509725 367 ntBASIC14.26□□□□□ -0.13
IFT52Q9Y366 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.26□□□□□ -0.13
IFT52Q9Y366 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.26□□□□□ -0.13
IFT52Q9Y366 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.26□□□□□ -0.13
IFT52Q9Y366 AC044860.1-202ENST00000559481 777 ntBASIC14.26□□□□□ -0.13
IFT52Q9Y366 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.26□□□□□ -0.13
IFT52Q9Y366 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
IFT52Q9Y366 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.26□□□□□ -0.13
IFT52Q9Y366 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.26□□□□□ -0.13
IFT52Q9Y366 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.26□□□□□ -0.13
IFT52Q9Y366 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
IFT52Q9Y366 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.26□□□□□ -0.13
IFT52Q9Y366 AC004461.2-201ENST00000629517 803 ntBASIC14.26□□□□□ -0.13
IFT52Q9Y366 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
IFT52Q9Y366 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFT52Q9Y366 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
IFT52Q9Y366 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
IFT52Q9Y366 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFT52Q9Y366 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFT52Q9Y366 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFT52Q9Y366 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFT52Q9Y366 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFT52Q9Y366 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFT52Q9Y366 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFT52Q9Y366 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.26□□□□□ -0.13
IFT52Q9Y366 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IFT52Q9Y366 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFT52Q9Y366 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFT52Q9Y366 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
IFT52Q9Y366 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFT52Q9Y366 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFT52Q9Y366 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
IFT52Q9Y366 BTBD7P1-201ENST00000447253 1453 ntBASIC14.25□□□□□ -0.13
IFT52Q9Y366 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
IFT52Q9Y366 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IFT52Q9Y366 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFT52Q9Y366 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
IFT52Q9Y366 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFT52Q9Y366 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.25□□□□□ -0.13
IFT52Q9Y366 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
IFT52Q9Y366 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFT52Q9Y366 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IFT52Q9Y366 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IFT52Q9Y366 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFT52Q9Y366 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.25□□□□□ -0.13
IFT52Q9Y366 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.25□□□□□ -0.13
IFT52Q9Y366 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.25□□□□□ -0.13
IFT52Q9Y366 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.25□□□□□ -0.13
IFT52Q9Y366 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.25□□□□□ -0.13
IFT52Q9Y366 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.25□□□□□ -0.13
IFT52Q9Y366 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
IFT52Q9Y366 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.25□□□□□ -0.13
IFT52Q9Y366 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFT52Q9Y366 AC092337.1-201ENST00000568699 1129 ntBASIC14.25□□□□□ -0.13
IFT52Q9Y366 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.25□□□□□ -0.13
IFT52Q9Y366 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.25□□□□□ -0.13
IFT52Q9Y366 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFT52Q9Y366 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFT52Q9Y366 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFT52Q9Y366 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
IFT52Q9Y366 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.25□□□□□ -0.13
IFT52Q9Y366 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFT52Q9Y366 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.25□□□□□ -0.13
IFT52Q9Y366 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFT52Q9Y366 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFT52Q9Y366 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFT52Q9Y366 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFT52Q9Y366 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.25□□□□□ -0.13
IFT52Q9Y366 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IFT52Q9Y366 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFT52Q9Y366 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
IFT52Q9Y366 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 AC100757.3-201ENST00000622361 1406 ntBASIC14.24□□□□□ -0.13
IFT52Q9Y366 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 AC067750.1-201ENST00000608826 6545 ntBASIC14.24□□□□□ -0.13
IFT52Q9Y366 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms