Protein–RNA interactions for Protein: Q9UNN4

GTF2A1L, TFIIA-alpha and beta-like factor, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1LQ9UNN4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 SPDYE17-201ENST00000412399 783 ntBASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 AC023141.5-201ENST00000458585 616 ntBASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 SERBP1P3-201ENST00000459980 809 ntBASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 AL079307.3-201ENST00000556114 283 ntBASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 AL133215.2-201ENST00000609242 977 ntBASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 AC090114.2-201ENST00000608477 7054 ntBASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
GTF2A1LQ9UNN4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 AL359258.3-201ENST00000622910 2331 ntBASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 AC005912.2-201ENST00000619492 2400 ntBASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 SPDYE7P-202ENST00000420373 878 ntBASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 FAM8A3P-201ENST00000427218 844 ntBASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 GPS2P2-201ENST00000430745 888 ntBASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.59□□□□□ -0.23
GTF2A1LQ9UNN4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms