Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 TSPY16P-201ENST00000449843 468 ntBASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 SPCS2P1-201ENST00000561636 679 ntBASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 AC104794.3-201ENST00000566840 1248 ntBASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 AC092364.2-202ENST00000597012 1073 ntBASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 AL390955.2-201ENST00000603032 514 ntBASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 AC000095.1-201ENST00000603208 874 ntBASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 AC087386.2-201ENST00000623212 4637 ntBASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 UCKL1-AS1-201ENST00000623569 3602 ntBASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 AL121723.1-201ENST00000445194 1519 ntBASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00474Q9P2X8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 HLA-DQB2-231ENST00000435145 2026 ntBASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 AC105250.1-201ENST00000509378 2057 ntBASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC9.96□□□□□ -0.81
LINC00474Q9P2X8 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00474Q9P2X8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC9.96□□□□□ -0.82
LINC00474Q9P2X8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00474Q9P2X8 SPDYE19P-201ENST00000338590 713 ntBASIC9.96□□□□□ -0.82
LINC00474Q9P2X8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00474Q9P2X8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
LINC00474Q9P2X8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00474Q9P2X8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00474Q9P2X8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00474Q9P2X8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00474Q9P2X8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC9.96□□□□□ -0.82
LINC00474Q9P2X8 PIN1P1-201ENST00000412108 996 ntBASIC9.96□□□□□ -0.82
LINC00474Q9P2X8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC9.96□□□□□ -0.82
LINC00474Q9P2X8 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC9.96□□□□□ -0.82
LINC00474Q9P2X8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00474Q9P2X8 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC9.96□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms