Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 TLE1P1-201ENST00000422965 589 ntBASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 AC007969.1-201ENST00000433675 447 ntBASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 AL391280.1-201ENST00000506969 1062 ntBASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 AP003171.2-201ENST00000528208 925 ntBASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 CR383656.12-201ENST00000549567 513 ntBASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 AC138696.2-201ENST00000607376 223 ntBASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 AC011840.2-201ENST00000563063 1520 ntBASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 AC020910.5-201ENST00000623668 1865 ntBASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 AL590640.2-201ENST00000457038 527 ntBASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 AC131206.1-201ENST00000538078 1211 ntBASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 ECM1P1-201ENST00000604092 1279 ntBASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BLOC1S4Q9NUP1 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms