Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 KRT18P27-201ENST00000427733 1299 ntBASIC18.09■□□□□ 0.49
RTN4Q9NQC3 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 AC022616.2-201ENST00000523185 300 ntBASIC18.09■□□□□ 0.49
RTN4Q9NQC3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 MIR3652-201ENST00000579335 131 ntBASIC18.09■□□□□ 0.49
RTN4Q9NQC3 AC006557.2-201ENST00000592985 1240 ntBASIC18.09■□□□□ 0.49
RTN4Q9NQC3 Metazoa_SRP.135-201ENST00000616324 269 ntBASIC18.09■□□□□ 0.49
RTN4Q9NQC3 GGTLC5P-201ENST00000617623 998 ntBASIC18.09■□□□□ 0.49
RTN4Q9NQC3 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 AC152010.1-201ENST00000415779 2006 ntBASIC18.09■□□□□ 0.49
RTN4Q9NQC3 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTN4Q9NQC3 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC18.08■□□□□ 0.49
RTN4Q9NQC3 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTN4Q9NQC3 AL592424.1-201ENST00000563624 1536 ntBASIC18.08■□□□□ 0.49
RTN4Q9NQC3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.08■□□□□ 0.49
RTN4Q9NQC3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTN4Q9NQC3 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTN4Q9NQC3 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RTN4Q9NQC3 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC18.08■□□□□ 0.49
RTN4Q9NQC3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTN4Q9NQC3 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC18.08■□□□□ 0.49
RTN4Q9NQC3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RTN4Q9NQC3 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC18.08■□□□□ 0.49
RTN4Q9NQC3 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
RTN4Q9NQC3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTN4Q9NQC3 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTN4Q9NQC3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RTN4Q9NQC3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.08■□□□□ 0.49
RTN4Q9NQC3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 DUSP5P1-201ENST00000441325 1139 ntBASIC18.08■□□□□ 0.48
RTN4Q9NQC3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 PIGG-201ENST00000310340 3203 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 PIGG-203ENST00000453061 3218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.08■□□□□ 0.48
RTN4Q9NQC3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.07■□□□□ 0.48
RTN4Q9NQC3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 AC022400.8-201ENST00000623453 3599 ntBASIC18.07■□□□□ 0.48
RTN4Q9NQC3 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 MIR648-201ENST00000385046 94 ntBASIC18.07■□□□□ 0.48
RTN4Q9NQC3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms