Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ATP6V0A4Q9HBG4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP6V0A4Q9HBG4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6V0A4Q9HBG4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6V0A4Q9HBG4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6V0A4Q9HBG4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP6V0A4Q9HBG4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6V0A4Q9HBG4 FLJ16779-201ENST00000612722 7638 ntBASIC16.83■□□□□ 0.28
ATP6V0A4Q9HBG4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 AL137783.1-201ENST00000623494 1896 ntBASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 TPM3P8-201ENST00000330554 643 ntBASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A4Q9HBG4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 LILRP1-201ENST00000444199 1370 ntBASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 AC245100.3-201ENST00000441281 285 ntBASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A4Q9HBG4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP6V0A4Q9HBG4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6V0A4Q9HBG4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP6V0A4Q9HBG4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6V0A4Q9HBG4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6V0A4Q9HBG4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6V0A4Q9HBG4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
ATP6V0A4Q9HBG4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6V0A4Q9HBG4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6V0A4Q9HBG4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6V0A4Q9HBG4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6V0A4Q9HBG4 AC006001.1-201ENST00000325130 474 ntBASIC16.8■□□□□ 0.28
ATP6V0A4Q9HBG4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms