Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.7■□□□□ 0.1
LRRC3Q9BY71 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.7■□□□□ 0.1
LRRC3Q9BY71 AL645939.5-201ENST00000606834 243 ntBASIC15.7■□□□□ 0.1
LRRC3Q9BY71 AC138649.2-201ENST00000615886 705 ntBASIC15.7■□□□□ 0.1
LRRC3Q9BY71 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC3Q9BY71 AL023803.2-201ENST00000620080 638 ntBASIC15.7■□□□□ 0.1
LRRC3Q9BY71 AC002472.3-201ENST00000640124 621 ntBASIC15.7■□□□□ 0.1
LRRC3Q9BY71 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.7■□□□□ 0.1
LRRC3Q9BY71 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC3Q9BY71 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC3Q9BY71 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.7■□□□□ 0.1
LRRC3Q9BY71 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC3Q9BY71 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC3Q9BY71 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.7■□□□□ 0.1
LRRC3Q9BY71 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC3Q9BY71 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC3Q9BY71 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.7■□□□□ 0.1
LRRC3Q9BY71 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
LRRC3Q9BY71 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.7■□□□□ 0.1
LRRC3Q9BY71 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.7■□□□□ 0.1
LRRC3Q9BY71 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC3Q9BY71 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 AL138725.1-201ENST00000407347 1314 ntBASIC15.69■□□□□ 0.1
LRRC3Q9BY71 AC020910.5-201ENST00000623668 1865 ntBASIC15.69■□□□□ 0.1
LRRC3Q9BY71 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 AC073347.1-201ENST00000421633 2643 ntBASIC15.69■□□□□ 0.1
LRRC3Q9BY71 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 RNMTL1P1-201ENST00000454103 560 ntBASIC15.69■□□□□ 0.1
LRRC3Q9BY71 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 AC022217.1-201ENST00000521069 738 ntBASIC15.69■□□□□ 0.1
LRRC3Q9BY71 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 AC105129.2-201ENST00000559536 390 ntBASIC15.69■□□□□ 0.1
LRRC3Q9BY71 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 AC005324.6-201ENST00000587972 613 ntBASIC15.69■□□□□ 0.1
LRRC3Q9BY71 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 AC138627.1-207ENST00000641560 1006 ntBASIC15.69■□□□□ 0.1
LRRC3Q9BY71 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
LRRC3Q9BY71 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 AC112693.3-201ENST00000624819 1983 ntBASIC15.68■□□□□ 0.1
LRRC3Q9BY71 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.68■□□□□ 0.1
LRRC3Q9BY71 AL662890.1-201ENST00000396818 632 ntBASIC15.68■□□□□ 0.1
LRRC3Q9BY71 AC010141.1-201ENST00000411585 623 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms