Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 SOCS2P1-201ENST00000417727 557 ntBASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 NUS1P3-201ENST00000423502 862 ntBASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 AC190387.1-201ENST00000551683 408 ntBASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 AC124283.3-201ENST00000570869 594 ntBASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 CTBP2P3-201ENST00000585629 1255 ntBASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 AL137783.1-201ENST00000623494 1896 ntBASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 INTS4P1-203ENST00000641008 3683 ntBASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 AC092364.2-202ENST00000597012 1073 ntBASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 AC092723.2-201ENST00000624955 793 ntBASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 AC018529.2-202ENST00000611482 3087 ntBASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC116Q8IYX3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms