Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 EIF3FP3-201ENST00000434851 1086 ntBASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 U91328.1-201ENST00000437528 223 ntBASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 AL162274.1-201ENST00000617191 1098 ntBASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 MIR6752-201ENST00000618442 71 ntBASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 BCRP2-202ENST00000447763 634 ntBASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 GPR53P-205ENST00000457298 1084 ntBASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 BCRP6-201ENST00000510112 632 ntBASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 BCRP7-201ENST00000511549 544 ntBASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 AC022616.1-201ENST00000518688 554 ntBASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 AC106886.1-201ENST00000568660 600 ntBASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 AC233724.13-201ENST00000598383 410 ntBASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD3Q7Z3D4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 AC007191.1-201ENST00000623179 2995 ntBASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 AC055811.4-201ENST00000624039 1754 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms