Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 SNHG9-202ENST00000564014 471 ntBASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 AL138828.2-201ENST00000615812 383 ntBASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 AC018442.1-201ENST00000421439 2061 ntBASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 CNN2P2-201ENST00000443536 909 ntBASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 CNN2P3-201ENST00000450201 906 ntBASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 HLA-J-203ENST00000494367 1087 ntBASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 AC027612.4-201ENST00000605371 583 ntBASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 AL136317.3-201ENST00000618497 906 ntBASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 BX640514.1-201ENST00000583223 1918 ntBASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMARCD3Q6STE5 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms