Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 AC007787.1-201ENST00000588095 1583 ntBASIC15.51■□□□□ 0.07
CASC4Q6P4E1 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.51■□□□□ 0.07
CASC4Q6P4E1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 AC000095.1-201ENST00000603208 874 ntBASIC15.51■□□□□ 0.07
CASC4Q6P4E1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 AC023511.2-201ENST00000618803 211 ntBASIC15.51■□□□□ 0.07
CASC4Q6P4E1 AL390754.1-201ENST00000619088 582 ntBASIC15.51■□□□□ 0.07
CASC4Q6P4E1 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CASC4Q6P4E1 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 AC087386.2-201ENST00000623212 4637 ntBASIC15.5■□□□□ 0.07
CASC4Q6P4E1 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.5■□□□□ 0.07
CASC4Q6P4E1 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 AC104457.1-201ENST00000401024 814 ntBASIC15.5■□□□□ 0.07
CASC4Q6P4E1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 METTL21AP1-201ENST00000438852 635 ntBASIC15.5■□□□□ 0.07
CASC4Q6P4E1 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 ZNF890P-202ENST00000530367 1156 ntBASIC15.5■□□□□ 0.07
CASC4Q6P4E1 DUX4L27-201ENST00000554796 1261 ntBASIC15.5■□□□□ 0.07
CASC4Q6P4E1 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms