Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.89□□□□□ -0.19
PUDPQ08623 CYMP-203ENST00000474680 1263 ntBASIC13.89□□□□□ -0.19
PUDPQ08623 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.89□□□□□ -0.19
PUDPQ08623 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.89□□□□□ -0.19
PUDPQ08623 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.89□□□□□ -0.19
PUDPQ08623 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PUDPQ08623 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PUDPQ08623 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.89□□□□□ -0.19
PUDPQ08623 SRD5A3P1-201ENST00000603021 949 ntBASIC13.89□□□□□ -0.19
PUDPQ08623 AL158212.4-201ENST00000624062 1286 ntBASIC13.89□□□□□ -0.19
PUDPQ08623 AC004840.1-201ENST00000636359 365 ntBASIC13.89□□□□□ -0.19
PUDPQ08623 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PUDPQ08623 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PUDPQ08623 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PUDPQ08623 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PUDPQ08623 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PUDPQ08623 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PUDPQ08623 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
PUDPQ08623 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PUDPQ08623 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.89□□□□□ -0.19
PUDPQ08623 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.89□□□□□ -0.19
PUDPQ08623 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
PUDPQ08623 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PUDPQ08623 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
PUDPQ08623 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PUDPQ08623 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.89□□□□□ -0.19
PUDPQ08623 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.89□□□□□ -0.19
PUDPQ08623 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PUDPQ08623 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.89□□□□□ -0.19
PUDPQ08623 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PUDPQ08623 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PUDPQ08623 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PUDPQ08623 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PUDPQ08623 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PUDPQ08623 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.88□□□□□ -0.19
PUDPQ08623 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PUDPQ08623 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.88□□□□□ -0.19
PUDPQ08623 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.88□□□□□ -0.19
PUDPQ08623 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PUDPQ08623 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PUDPQ08623 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.88□□□□□ -0.19
PUDPQ08623 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.88□□□□□ -0.19
PUDPQ08623 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.88□□□□□ -0.19
PUDPQ08623 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.88□□□□□ -0.19
PUDPQ08623 SPDYE18-201ENST00000510091 1050 ntBASIC13.88□□□□□ -0.19
PUDPQ08623 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.88□□□□□ -0.19
PUDPQ08623 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.88□□□□□ -0.19
PUDPQ08623 AC104794.3-201ENST00000566840 1248 ntBASIC13.88□□□□□ -0.19
PUDPQ08623 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
PUDPQ08623 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.88□□□□□ -0.19
PUDPQ08623 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.88□□□□□ -0.19
PUDPQ08623 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PUDPQ08623 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.88□□□□□ -0.19
PUDPQ08623 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.88□□□□□ -0.19
PUDPQ08623 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.88□□□□□ -0.19
PUDPQ08623 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.88□□□□□ -0.19
PUDPQ08623 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 AL359183.1-201ENST00000623796 2132 ntBASIC13.88□□□□□ -0.19
PUDPQ08623 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PUDPQ08623 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.88□□□□□ -0.19
PUDPQ08623 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PUDPQ08623 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PUDPQ08623 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PUDPQ08623 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
PUDPQ08623 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PUDPQ08623 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
PUDPQ08623 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PUDPQ08623 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.87□□□□□ -0.19
PUDPQ08623 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
PUDPQ08623 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.87□□□□□ -0.19
PUDPQ08623 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PUDPQ08623 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PUDPQ08623 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PUDPQ08623 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PUDPQ08623 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms