Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 REXO1L4P-201ENST00000605109 1937 ntBASIC14.41□□□□□ -0.1
CHRNB3Q05901 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 AC004461.1-201ENST00000412461 403 ntBASIC14.4□□□□□ -0.1
CHRNB3Q05901 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CHRNB3Q05901 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHRNB3Q05901 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHRNB3Q05901 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRNB3Q05901 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHRNB3Q05901 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHRNB3Q05901 MBLAC2-202ENST00000514906 1936 ntBASIC14.39□□□□□ -0.11
CHRNB3Q05901 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.39□□□□□ -0.11
CHRNB3Q05901 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.39□□□□□ -0.11
CHRNB3Q05901 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRNB3Q05901 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CHRNB3Q05901 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRNB3Q05901 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.39□□□□□ -0.11
CHRNB3Q05901 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRNB3Q05901 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.39□□□□□ -0.11
CHRNB3Q05901 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.39□□□□□ -0.11
CHRNB3Q05901 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRNB3Q05901 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
CHRNB3Q05901 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRNB3Q05901 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.39□□□□□ -0.11
CHRNB3Q05901 FO393414.2-201ENST00000405153 598 ntBASIC14.39□□□□□ -0.11
CHRNB3Q05901 AC005237.2-201ENST00000434368 219 ntBASIC14.39□□□□□ -0.11
CHRNB3Q05901 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.39□□□□□ -0.11
CHRNB3Q05901 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CHRNB3Q05901 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.39□□□□□ -0.11
CHRNB3Q05901 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CHRNB3Q05901 AC022145.2-201ENST00000598203 171 ntBASIC14.39□□□□□ -0.11
CHRNB3Q05901 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHRNB3Q05901 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.39□□□□□ -0.11
CHRNB3Q05901 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CHRNB3Q05901 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRNB3Q05901 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CHRNB3Q05901 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CHRNB3Q05901 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRNB3Q05901 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms