Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.43□□□□□ -0.26
NKX6-1P78426 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.43□□□□□ -0.26
NKX6-1P78426 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.43□□□□□ -0.26
NKX6-1P78426 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NKX6-1P78426 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
NKX6-1P78426 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
NKX6-1P78426 AL139099.5-201ENST00000635274 300 ntBASIC13.43□□□□□ -0.26
NKX6-1P78426 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.43□□□□□ -0.26
NKX6-1P78426 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.43□□□□□ -0.26
NKX6-1P78426 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
NKX6-1P78426 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NKX6-1P78426 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
NKX6-1P78426 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NKX6-1P78426 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
NKX6-1P78426 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
NKX6-1P78426 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 MIR1247-201ENST00000408206 136 ntBASIC13.42□□□□□ -0.26
NKX6-1P78426 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX6-1P78426 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.42□□□□□ -0.26
NKX6-1P78426 SOCS2P1-201ENST00000417727 557 ntBASIC13.42□□□□□ -0.26
NKX6-1P78426 GPAA1P2-201ENST00000417923 928 ntBASIC13.42□□□□□ -0.26
NKX6-1P78426 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
NKX6-1P78426 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.42□□□□□ -0.26
NKX6-1P78426 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX6-1P78426 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.42□□□□□ -0.26
NKX6-1P78426 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX6-1P78426 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.42□□□□□ -0.26
NKX6-1P78426 AL049840.4-201ENST00000602422 811 ntBASIC13.42□□□□□ -0.26
NKX6-1P78426 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.42□□□□□ -0.26
NKX6-1P78426 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX6-1P78426 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.42□□□□□ -0.26
NKX6-1P78426 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 SNX18-202ENST00000343017 3140 ntBASIC13.42□□□□□ -0.26
NKX6-1P78426 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX6-1P78426 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX6-1P78426 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX6-1P78426 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.42□□□□□ -0.26
NKX6-1P78426 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX6-1P78426 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
NKX6-1P78426 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
NKX6-1P78426 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX6-1P78426 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
NKX6-1P78426 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX6-1P78426 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.41□□□□□ -0.26
NKX6-1P78426 AC127383.1-201ENST00000444697 1800 ntBASIC13.41□□□□□ -0.26
NKX6-1P78426 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
NKX6-1P78426 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
NKX6-1P78426 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 INTS4P2-202ENST00000614726 2019 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms