Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.14□□□□□ -0.15
PSMD4P55036 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PSMD4P55036 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PSMD4P55036 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.14□□□□□ -0.15
PSMD4P55036 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.14□□□□□ -0.15
PSMD4P55036 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 AC098614.1-201ENST00000368528 745 ntBASIC14.14□□□□□ -0.15
PSMD4P55036 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PSMD4P55036 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 ELK1P1-201ENST00000485699 580 ntBASIC14.14□□□□□ -0.15
PSMD4P55036 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.14□□□□□ -0.15
PSMD4P55036 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PSMD4P55036 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
PSMD4P55036 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
PSMD4P55036 AL359711.2-201ENST00000563105 872 ntBASIC14.14□□□□□ -0.15
PSMD4P55036 AC124283.3-201ENST00000570869 594 ntBASIC14.14□□□□□ -0.15
PSMD4P55036 AC138761.1-201ENST00000584393 385 ntBASIC14.14□□□□□ -0.15
PSMD4P55036 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.14□□□□□ -0.15
PSMD4P55036 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 AL358472.5-202ENST00000641448 1267 ntBASIC14.14□□□□□ -0.15
PSMD4P55036 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PSMD4P55036 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.14□□□□□ -0.15
PSMD4P55036 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PSMD4P55036 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PSMD4P55036 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.13□□□□□ -0.15
PSMD4P55036 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PSMD4P55036 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.13□□□□□ -0.15
PSMD4P55036 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.13□□□□□ -0.15
PSMD4P55036 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.13□□□□□ -0.15
PSMD4P55036 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.13□□□□□ -0.15
PSMD4P55036 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PSMD4P55036 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PSMD4P55036 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.13□□□□□ -0.15
PSMD4P55036 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PSMD4P55036 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.13□□□□□ -0.15
PSMD4P55036 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.13□□□□□ -0.15
PSMD4P55036 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PSMD4P55036 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.13□□□□□ -0.15
PSMD4P55036 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.13□□□□□ -0.15
PSMD4P55036 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 SPDYE22P-201ENST00000582158 798 ntBASIC14.13□□□□□ -0.15
PSMD4P55036 MIR3197-201ENST00000582241 73 ntBASIC14.13□□□□□ -0.15
PSMD4P55036 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.13□□□□□ -0.15
PSMD4P55036 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.13□□□□□ -0.15
PSMD4P55036 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.13□□□□□ -0.15
PSMD4P55036 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
PSMD4P55036 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PSMD4P55036 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PSMD4P55036 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms