Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.84□□□□□ -0.19
CENPAP49450 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.84□□□□□ -0.19
CENPAP49450 CNN2P2-201ENST00000443536 909 ntBASIC13.84□□□□□ -0.19
CENPAP49450 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.84□□□□□ -0.19
CENPAP49450 AP006288.1-201ENST00000446065 395 ntBASIC13.84□□□□□ -0.19
CENPAP49450 CNN2P3-201ENST00000450201 906 ntBASIC13.84□□□□□ -0.19
CENPAP49450 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CENPAP49450 RN7SL618P-201ENST00000477850 296 ntBASIC13.84□□□□□ -0.19
CENPAP49450 AC125807.1-201ENST00000483097 614 ntBASIC13.84□□□□□ -0.19
CENPAP49450 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.84□□□□□ -0.19
CENPAP49450 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
CENPAP49450 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.84□□□□□ -0.19
CENPAP49450 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.84□□□□□ -0.19
CENPAP49450 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.84□□□□□ -0.19
CENPAP49450 AL691403.2-201ENST00000618460 490 ntBASIC13.84□□□□□ -0.19
CENPAP49450 AL136317.3-201ENST00000618497 906 ntBASIC13.84□□□□□ -0.19
CENPAP49450 Z92544.3-201ENST00000624747 417 ntBASIC13.84□□□□□ -0.19
CENPAP49450 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.84□□□□□ -0.19
CENPAP49450 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.84□□□□□ -0.19
CENPAP49450 AF228730.6-201ENST00000641497 218 ntBASIC13.84□□□□□ -0.19
CENPAP49450 AC084121.3-201ENST00000641716 218 ntBASIC13.84□□□□□ -0.19
CENPAP49450 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
CENPAP49450 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CENPAP49450 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.84□□□□□ -0.19
CENPAP49450 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.84□□□□□ -0.19
CENPAP49450 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.84□□□□□ -0.19
CENPAP49450 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.84□□□□□ -0.19
CENPAP49450 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CENPAP49450 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.84□□□□□ -0.19
CENPAP49450 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.84□□□□□ -0.19
CENPAP49450 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CENPAP49450 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CENPAP49450 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CENPAP49450 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.19
CENPAP49450 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CENPAP49450 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CENPAP49450 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.83□□□□□ -0.19
CENPAP49450 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CENPAP49450 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CENPAP49450 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
CENPAP49450 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.83□□□□□ -0.2
CENPAP49450 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CENPAP49450 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CENPAP49450 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CENPAP49450 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CENPAP49450 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CENPAP49450 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CENPAP49450 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CENPAP49450 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CENPAP49450 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CENPAP49450 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CENPAP49450 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
CENPAP49450 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CENPAP49450 AL080243.2-201ENST00000418783 582 ntBASIC13.83□□□□□ -0.2
CENPAP49450 KRT18P64-201ENST00000434946 1219 ntBASIC13.83□□□□□ -0.2
CENPAP49450 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.83□□□□□ -0.2
CENPAP49450 AC025678.2-201ENST00000562061 970 ntBASIC13.83□□□□□ -0.2
CENPAP49450 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CENPAP49450 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.83□□□□□ -0.2
CENPAP49450 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CENPAP49450 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CENPAP49450 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CENPAP49450 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CENPAP49450 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
CENPAP49450 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CENPAP49450 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CENPAP49450 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.83□□□□□ -0.2
CENPAP49450 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.83□□□□□ -0.2
CENPAP49450 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
CENPAP49450 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CENPAP49450 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CENPAP49450 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CENPAP49450 TUBB3P1-201ENST00000405796 1332 ntBASIC13.83□□□□□ -0.2
CENPAP49450 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CENPAP49450 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CENPAP49450 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CENPAP49450 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.83□□□□□ -0.2
CENPAP49450 AL009178.2-201ENST00000597278 2719 ntBASIC13.83□□□□□ -0.2
CENPAP49450 CICP23-201ENST00000605013 2741 ntBASIC13.83□□□□□ -0.2
CENPAP49450 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CENPAP49450 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CENPAP49450 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.82□□□□□ -0.2
CENPAP49450 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CENPAP49450 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms