Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC079140.1-201ENST00000508039 487 ntBASIC12.54□□□□□ -0.4
SNCAP37840 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.54□□□□□ -0.4
SNCAP37840 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.54□□□□□ -0.4
SNCAP37840 AC243562.1-201ENST00000560672 389 ntBASIC12.54□□□□□ -0.4
SNCAP37840 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.54□□□□□ -0.4
SNCAP37840 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.54□□□□□ -0.4
SNCAP37840 AC092902.6-201ENST00000641783 218 ntBASIC12.54□□□□□ -0.4
SNCAP37840 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SNCAP37840 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.54□□□□□ -0.4
SNCAP37840 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.54□□□□□ -0.4
SNCAP37840 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SNCAP37840 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
SNCAP37840 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 WASH3P-207ENST00000560956 1394 ntBASIC12.54□□□□□ -0.4
SNCAP37840 FO538757.1-201ENST00000623083 1397 ntBASIC12.54□□□□□ -0.4
SNCAP37840 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
SNCAP37840 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SNCAP37840 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.54□□□□□ -0.4
SNCAP37840 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SNCAP37840 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.54□□□□□ -0.4
SNCAP37840 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNCAP37840 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
SNCAP37840 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNCAP37840 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNCAP37840 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
SNCAP37840 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.53□□□□□ -0.4
SNCAP37840 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNCAP37840 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SNCAP37840 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.53□□□□□ -0.4
SNCAP37840 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.53□□□□□ -0.4
SNCAP37840 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.53□□□□□ -0.4
SNCAP37840 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SNCAP37840 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.53□□□□□ -0.4
SNCAP37840 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNCAP37840 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNCAP37840 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SNCAP37840 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNCAP37840 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
SNCAP37840 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SNCAP37840 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.53□□□□□ -0.4
SNCAP37840 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNCAP37840 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNCAP37840 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SNCAP37840 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNCAP37840 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SNCAP37840 AL353705.2-201ENST00000428243 662 ntBASIC12.53□□□□□ -0.4
SNCAP37840 SPCS2P4-201ENST00000436160 681 ntBASIC12.53□□□□□ -0.4
SNCAP37840 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.53□□□□□ -0.4
SNCAP37840 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.53□□□□□ -0.4
SNCAP37840 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.53□□□□□ -0.4
SNCAP37840 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.53□□□□□ -0.4
SNCAP37840 AC040169.1-201ENST00000565382 521 ntBASIC12.53□□□□□ -0.4
SNCAP37840 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.53□□□□□ -0.4
SNCAP37840 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNCAP37840 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.53□□□□□ -0.4
SNCAP37840 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SNCAP37840 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.53□□□□□ -0.4
SNCAP37840 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNCAP37840 AP001267.2-201ENST00000532619 2086 ntBASIC12.53□□□□□ -0.4
SNCAP37840 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.53□□□□□ -0.4
SNCAP37840 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNCAP37840 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNCAP37840 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNCAP37840 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.53□□□□□ -0.4
SNCAP37840 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SNCAP37840 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SNCAP37840 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
SNCAP37840 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SNCAP37840 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SNCAP37840 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
SNCAP37840 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.52□□□□□ -0.4
SNCAP37840 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SNCAP37840 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SNCAP37840 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SNCAP37840 ACE3P-201ENST00000423435 1973 ntBASIC12.52□□□□□ -0.4
SNCAP37840 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
SNCAP37840 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
SNCAP37840 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
SNCAP37840 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
SNCAP37840 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SNCAP37840 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SNCAP37840 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.52□□□□□ -0.4
SNCAP37840 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.52□□□□□ -0.4
SNCAP37840 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SNCAP37840 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms