Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.99■□□□□ 0.15
RFC1P35251 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFC1P35251 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.99■□□□□ 0.15
RFC1P35251 TERF1P3-201ENST00000505638 1227 ntBASIC15.99■□□□□ 0.15
RFC1P35251 AP001582.1-201ENST00000525856 295 ntBASIC15.99■□□□□ 0.15
RFC1P35251 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.99■□□□□ 0.15
RFC1P35251 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFC1P35251 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.99■□□□□ 0.15
RFC1P35251 WASH4P-201ENST00000564273 1246 ntBASIC15.99■□□□□ 0.15
RFC1P35251 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RFC1P35251 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.99■□□□□ 0.15
RFC1P35251 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.99■□□□□ 0.15
RFC1P35251 AC133539.2-201ENST00000604757 467 ntBASIC15.99■□□□□ 0.15
RFC1P35251 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RFC1P35251 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.99■□□□□ 0.15
RFC1P35251 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC1P35251 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC1P35251 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RFC1P35251 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RFC1P35251 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.99■□□□□ 0.15
RFC1P35251 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.99■□□□□ 0.15
RFC1P35251 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFC1P35251 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC1P35251 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RFC1P35251 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC1P35251 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFC1P35251 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC1P35251 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
RFC1P35251 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFC1P35251 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC1P35251 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.98■□□□□ 0.15
RFC1P35251 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RFC1P35251 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFC1P35251 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
RFC1P35251 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC1P35251 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC1P35251 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC1P35251 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.98■□□□□ 0.15
RFC1P35251 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC1P35251 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RFC1P35251 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFC1P35251 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC1P35251 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC1P35251 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC1P35251 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFC1P35251 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.98■□□□□ 0.15
RFC1P35251 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.98■□□□□ 0.15
RFC1P35251 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RFC1P35251 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC1P35251 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
RFC1P35251 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.98■□□□□ 0.15
RFC1P35251 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.98■□□□□ 0.15
RFC1P35251 NUS1P3-201ENST00000423502 862 ntBASIC15.98■□□□□ 0.15
RFC1P35251 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.98■□□□□ 0.15
RFC1P35251 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.98■□□□□ 0.15
RFC1P35251 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.98■□□□□ 0.15
RFC1P35251 AC140912.1-201ENST00000577171 1054 ntBASIC15.98■□□□□ 0.15
RFC1P35251 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFC1P35251 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.98■□□□□ 0.15
RFC1P35251 WFDC1-204ENST00000613603 549 ntBASIC15.98■□□□□ 0.15
RFC1P35251 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RFC1P35251 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC1P35251 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RFC1P35251 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC1P35251 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC1P35251 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.98■□□□□ 0.15
RFC1P35251 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RFC1P35251 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFC1P35251 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.98■□□□□ 0.15
RFC1P35251 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC1P35251 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 AC099063.4-201ENST00000641099 1602 ntBASIC15.97■□□□□ 0.15
RFC1P35251 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.97■□□□□ 0.15
RFC1P35251 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RFC1P35251 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.97■□□□□ 0.15
RFC1P35251 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RFC1P35251 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 AL390755.1-201ENST00000623716 2027 ntBASIC15.97■□□□□ 0.15
RFC1P35251 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RFC1P35251 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.97■□□□□ 0.15
RFC1P35251 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RFC1P35251 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
RFC1P35251 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
RFC1P35251 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RFC1P35251 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RFC1P35251 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.97■□□□□ 0.15
RFC1P35251 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.97■□□□□ 0.15
RFC1P35251 TP53TG3HP-202ENST00000569755 579 ntBASIC15.97■□□□□ 0.15
RFC1P35251 AC005252.2-201ENST00000624630 1141 ntBASIC15.97■□□□□ 0.15
RFC1P35251 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms