Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC007787.1-201ENST00000588095 1583 ntBASIC14.8□□□□□ -0.04
CDH1P12830 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH1P12830 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CDH1P12830 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDH1P12830 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH1P12830 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH1P12830 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH1P12830 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH1P12830 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CDH1P12830 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH1P12830 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
CDH1P12830 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CDH1P12830 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH1P12830 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH1P12830 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH1P12830 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
CDH1P12830 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CDH1P12830 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH1P12830 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH1P12830 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH1P12830 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH1P12830 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH1P12830 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH1P12830 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CDH1P12830 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH1P12830 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH1P12830 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH1P12830 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH1P12830 DGCR5-201ENST00000399539 862 ntBASIC14.79□□□□□ -0.04
CDH1P12830 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.79□□□□□ -0.04
CDH1P12830 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH1P12830 REXO1L2P-201ENST00000425429 2069 ntBASIC14.79□□□□□ -0.04
CDH1P12830 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH1P12830 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.79□□□□□ -0.04
CDH1P12830 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH1P12830 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH1P12830 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.79□□□□□ -0.04
CDH1P12830 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.79□□□□□ -0.04
CDH1P12830 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.79□□□□□ -0.04
CDH1P12830 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CDH1P12830 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.79□□□□□ -0.04
CDH1P12830 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH1P12830 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.79□□□□□ -0.04
CDH1P12830 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH1P12830 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.79□□□□□ -0.04
CDH1P12830 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH1P12830 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH1P12830 AC133539.2-201ENST00000604757 467 ntBASIC14.79□□□□□ -0.04
CDH1P12830 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.79□□□□□ -0.04
CDH1P12830 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH1P12830 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.79□□□□□ -0.04
CDH1P12830 WFDC1-204ENST00000613603 549 ntBASIC14.79□□□□□ -0.04
CDH1P12830 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CDH1P12830 AC079781.5-202ENST00000641784 3743 ntBASIC14.79□□□□□ -0.04
CDH1P12830 AC015656.1-201ENST00000624209 3578 ntBASIC14.79□□□□□ -0.04
CDH1P12830 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CDH1P12830 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CDH1P12830 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH1P12830 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CDH1P12830 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH1P12830 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH1P12830 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CDH1P12830 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 KRT8P22-201ENST00000562317 1415 ntBASIC14.78□□□□□ -0.04
CDH1P12830 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 AC093525.8-201ENST00000624099 1342 ntBASIC14.78□□□□□ -0.04
CDH1P12830 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.78□□□□□ -0.04
CDH1P12830 AP001582.1-201ENST00000525856 295 ntBASIC14.78□□□□□ -0.04
CDH1P12830 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.78□□□□□ -0.04
CDH1P12830 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.78□□□□□ -0.04
CDH1P12830 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH1P12830 MIR3197-201ENST00000582241 73 ntBASIC14.78□□□□□ -0.04
CDH1P12830 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH1P12830 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH1P12830 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH1P12830 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDH1P12830 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CDH1P12830 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH1P12830 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH1P12830 AC097376.2-205ENST00000610159 5334 ntBASIC14.78□□□□□ -0.04
CDH1P12830 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDH1P12830 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms