Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.21■□□□□ 0.03
APOA4P06727 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.21■□□□□ 0.03
APOA4P06727 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOA4P06727 AC018442.1-201ENST00000421439 2061 ntBASIC15.21■□□□□ 0.03
APOA4P06727 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOA4P06727 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.21■□□□□ 0.03
APOA4P06727 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.21■□□□□ 0.03
APOA4P06727 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APOA4P06727 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOA4P06727 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APOA4P06727 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOA4P06727 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOA4P06727 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.21■□□□□ 0.03
APOA4P06727 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
APOA4P06727 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APOA4P06727 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.21■□□□□ 0.03
APOA4P06727 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOA4P06727 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOA4P06727 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOA4P06727 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
APOA4P06727 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.21■□□□□ 0.03
APOA4P06727 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOA4P06727 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APOA4P06727 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.21■□□□□ 0.03
APOA4P06727 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APOA4P06727 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
APOA4P06727 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
APOA4P06727 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
APOA4P06727 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.21■□□□□ 0.03
APOA4P06727 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.21■□□□□ 0.03
APOA4P06727 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.21■□□□□ 0.03
APOA4P06727 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.21■□□□□ 0.03
APOA4P06727 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.21■□□□□ 0.03
APOA4P06727 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.21■□□□□ 0.03
APOA4P06727 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.21■□□□□ 0.03
APOA4P06727 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.21■□□□□ 0.03
APOA4P06727 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.21■□□□□ 0.03
APOA4P06727 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
APOA4P06727 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.21■□□□□ 0.03
APOA4P06727 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.21■□□□□ 0.03
APOA4P06727 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.21■□□□□ 0.03
APOA4P06727 AC093726.1-201ENST00000608064 963 ntBASIC15.21■□□□□ 0.03
APOA4P06727 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APOA4P06727 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.21■□□□□ 0.03
APOA4P06727 INTS4P1-203ENST00000641008 3683 ntBASIC15.21■□□□□ 0.03
APOA4P06727 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
APOA4P06727 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOA4P06727 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOA4P06727 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
APOA4P06727 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOA4P06727 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
APOA4P06727 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
APOA4P06727 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
APOA4P06727 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
APOA4P06727 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
APOA4P06727 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.21■□□□□ 0.02
APOA4P06727 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.21■□□□□ 0.02
APOA4P06727 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.2■□□□□ 0.02
APOA4P06727 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
APOA4P06727 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.2■□□□□ 0.02
APOA4P06727 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.2■□□□□ 0.02
APOA4P06727 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.2■□□□□ 0.02
APOA4P06727 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.2■□□□□ 0.02
APOA4P06727 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.2■□□□□ 0.02
APOA4P06727 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 MIR661-201ENST00000384842 89 ntBASIC15.2■□□□□ 0.02
APOA4P06727 PIN1P1-201ENST00000412108 996 ntBASIC15.2■□□□□ 0.02
APOA4P06727 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.2■□□□□ 0.02
APOA4P06727 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.2■□□□□ 0.02
APOA4P06727 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.2■□□□□ 0.02
APOA4P06727 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.2■□□□□ 0.02
APOA4P06727 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.2■□□□□ 0.02
APOA4P06727 AC092364.2-202ENST00000597012 1073 ntBASIC15.2■□□□□ 0.02
APOA4P06727 AL049840.4-201ENST00000602422 811 ntBASIC15.2■□□□□ 0.02
APOA4P06727 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.2■□□□□ 0.02
APOA4P06727 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.2■□□□□ 0.02
APOA4P06727 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.2■□□□□ 0.02
APOA4P06727 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.2■□□□□ 0.02
APOA4P06727 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.2■□□□□ 0.02
APOA4P06727 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APOA4P06727 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms