Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.49□□□□□ -0.25
APOC1P02654 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.49□□□□□ -0.25
APOC1P02654 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC1P02654 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.49□□□□□ -0.25
APOC1P02654 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
APOC1P02654 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
APOC1P02654 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC1P02654 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.49□□□□□ -0.25
APOC1P02654 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.49□□□□□ -0.25
APOC1P02654 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.49□□□□□ -0.25
APOC1P02654 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC1P02654 AC000095.1-201ENST00000603208 874 ntBASIC13.49□□□□□ -0.25
APOC1P02654 LINC01115-203ENST00000606068 577 ntBASIC13.49□□□□□ -0.25
APOC1P02654 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
APOC1P02654 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC1P02654 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC1P02654 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC1P02654 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
APOC1P02654 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.49□□□□□ -0.25
APOC1P02654 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.49□□□□□ -0.25
APOC1P02654 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
APOC1P02654 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.48□□□□□ -0.25
APOC1P02654 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.48□□□□□ -0.25
APOC1P02654 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.48□□□□□ -0.25
APOC1P02654 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
APOC1P02654 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.48□□□□□ -0.25
APOC1P02654 AC241585.1-201ENST00000433527 519 ntBASIC13.48□□□□□ -0.25
APOC1P02654 KRT18P64-201ENST00000434946 1219 ntBASIC13.48□□□□□ -0.25
APOC1P02654 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.48□□□□□ -0.25
APOC1P02654 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
APOC1P02654 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.48□□□□□ -0.25
APOC1P02654 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.48□□□□□ -0.25
APOC1P02654 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.48□□□□□ -0.25
APOC1P02654 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
APOC1P02654 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
APOC1P02654 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
APOC1P02654 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
APOC1P02654 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.48□□□□□ -0.25
APOC1P02654 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.48□□□□□ -0.25
APOC1P02654 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
APOC1P02654 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOC1P02654 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.47□□□□□ -0.25
APOC1P02654 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.47□□□□□ -0.25
APOC1P02654 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.47□□□□□ -0.25
APOC1P02654 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
APOC1P02654 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
APOC1P02654 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.47□□□□□ -0.25
APOC1P02654 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.47□□□□□ -0.25
APOC1P02654 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOC1P02654 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
APOC1P02654 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms