Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.23□□□□□ -0.13
HCN1O60741 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.23□□□□□ -0.13
HCN1O60741 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.23□□□□□ -0.13
HCN1O60741 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HCN1O60741 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HCN1O60741 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.23□□□□□ -0.13
HCN1O60741 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.23□□□□□ -0.13
HCN1O60741 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.23□□□□□ -0.13
HCN1O60741 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
HCN1O60741 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.23□□□□□ -0.13
HCN1O60741 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.23□□□□□ -0.13
HCN1O60741 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HCN1O60741 AC007389.4-201ENST00000454674 793 ntBASIC14.23□□□□□ -0.13
HCN1O60741 RN7SL837P-201ENST00000463010 287 ntBASIC14.23□□□□□ -0.13
HCN1O60741 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.23□□□□□ -0.13
HCN1O60741 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.23□□□□□ -0.13
HCN1O60741 AC106886.1-201ENST00000568660 600 ntBASIC14.23□□□□□ -0.13
HCN1O60741 AC132938.2-201ENST00000579188 680 ntBASIC14.23□□□□□ -0.13
HCN1O60741 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.23□□□□□ -0.13
HCN1O60741 WFDC1-204ENST00000613603 549 ntBASIC14.23□□□□□ -0.13
HCN1O60741 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.23□□□□□ -0.13
HCN1O60741 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
HCN1O60741 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
HCN1O60741 AL033527.5-201ENST00000641382 801 ntBASIC14.23□□□□□ -0.13
HCN1O60741 AL591163.1-201ENST00000641757 987 ntBASIC14.23□□□□□ -0.13
HCN1O60741 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HCN1O60741 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HCN1O60741 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HCN1O60741 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HCN1O60741 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HCN1O60741 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.23□□□□□ -0.13
HCN1O60741 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.23□□□□□ -0.13
HCN1O60741 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.22□□□□□ -0.13
HCN1O60741 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HCN1O60741 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.22□□□□□ -0.13
HCN1O60741 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HCN1O60741 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.22□□□□□ -0.13
HCN1O60741 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.22□□□□□ -0.13
HCN1O60741 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 AC005912.2-201ENST00000619492 2400 ntBASIC14.22□□□□□ -0.13
HCN1O60741 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.22□□□□□ -0.13
HCN1O60741 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HCN1O60741 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HCN1O60741 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HCN1O60741 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
HCN1O60741 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.22□□□□□ -0.13
HCN1O60741 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 FAM86LP-201ENST00000478302 853 ntBASIC14.22□□□□□ -0.13
HCN1O60741 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.22□□□□□ -0.13
HCN1O60741 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.22□□□□□ -0.13
HCN1O60741 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HCN1O60741 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.22□□□□□ -0.13
HCN1O60741 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.22□□□□□ -0.13
HCN1O60741 AL162274.1-201ENST00000617191 1098 ntBASIC14.22□□□□□ -0.13
HCN1O60741 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.22□□□□□ -0.13
HCN1O60741 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.22□□□□□ -0.13
HCN1O60741 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN1O60741 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms