Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
KCNQ3O43525 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KCNQ3O43525 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
KCNQ3O43525 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KCNQ3O43525 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KCNQ3O43525 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
KCNQ3O43525 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC19.17■□□□□ 0.66
KCNQ3O43525 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KCNQ3O43525 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KCNQ3O43525 RBM38-204ENST00000371219 760 ntTSL 2 BASIC19.17■□□□□ 0.66
KCNQ3O43525 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
KCNQ3O43525 TLE1P1-201ENST00000422965 589 ntBASIC19.17■□□□□ 0.66
KCNQ3O43525 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC19.17■□□□□ 0.66
KCNQ3O43525 RERG-205ENST00000537647 935 ntTSL 2 BASIC19.17■□□□□ 0.66
KCNQ3O43525 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC19.17■□□□□ 0.66
KCNQ3O43525 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC19.17■□□□□ 0.66
KCNQ3O43525 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC19.17■□□□□ 0.66
KCNQ3O43525 CDK7-214ENST00000626796 358 ntTSL 5 BASIC19.17■□□□□ 0.66
KCNQ3O43525 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC19.17■□□□□ 0.66
KCNQ3O43525 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
KCNQ3O43525 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KCNQ3O43525 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
KCNQ3O43525 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KCNQ3O43525 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KCNQ3O43525 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
KCNQ3O43525 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
KCNQ3O43525 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KCNQ3O43525 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
KCNQ3O43525 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
KCNQ3O43525 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
KCNQ3O43525 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC19.16■□□□□ 0.66
KCNQ3O43525 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
KCNQ3O43525 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KCNQ3O43525 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
KCNQ3O43525 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC19.16■□□□□ 0.66
KCNQ3O43525 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KCNQ3O43525 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KCNQ3O43525 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC19.16■□□□□ 0.66
KCNQ3O43525 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KCNQ3O43525 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC19.16■□□□□ 0.66
KCNQ3O43525 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KCNQ3O43525 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KCNQ3O43525 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC19.16■□□□□ 0.66
KCNQ3O43525 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KCNQ3O43525 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC19.16■□□□□ 0.66
KCNQ3O43525 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
KCNQ3O43525 RN7SL720P-201ENST00000488178 304 ntBASIC19.16■□□□□ 0.66
KCNQ3O43525 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
KCNQ3O43525 AC134698.3-201ENST00000523880 214 ntBASIC19.16■□□□□ 0.66
KCNQ3O43525 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
KCNQ3O43525 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
KCNQ3O43525 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
KCNQ3O43525 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC19.16■□□□□ 0.66
KCNQ3O43525 AC103988.2-201ENST00000561804 725 ntBASIC19.16■□□□□ 0.66
KCNQ3O43525 AC008825.2-201ENST00000603374 718 ntBASIC19.16■□□□□ 0.66
KCNQ3O43525 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KCNQ3O43525 AC079336.7-201ENST00000623428 1078 ntBASIC19.16■□□□□ 0.66
KCNQ3O43525 CU633904.3-201ENST00000624042 1029 ntBASIC19.16■□□□□ 0.66
KCNQ3O43525 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KCNQ3O43525 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KCNQ3O43525 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KCNQ3O43525 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KCNQ3O43525 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.16■□□□□ 0.66
KCNQ3O43525 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KCNQ3O43525 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KCNQ3O43525 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KCNQ3O43525 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KCNQ3O43525 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KCNQ3O43525 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
KCNQ3O43525 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KCNQ3O43525 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC19.15■□□□□ 0.66
KCNQ3O43525 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC19.15■□□□□ 0.66
KCNQ3O43525 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.15■□□□□ 0.66
KCNQ3O43525 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
KCNQ3O43525 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KCNQ3O43525 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KCNQ3O43525 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KCNQ3O43525 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC19.15■□□□□ 0.66
KCNQ3O43525 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KCNQ3O43525 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KCNQ3O43525 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KCNQ3O43525 HNRNPA1P41-201ENST00000397777 928 ntBASIC19.15■□□□□ 0.66
KCNQ3O43525 AC011742.3-201ENST00000439053 820 ntBASIC19.15■□□□□ 0.66
KCNQ3O43525 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.15■□□□□ 0.66
KCNQ3O43525 AL645933.1-201ENST00000440087 609 ntBASIC19.15■□□□□ 0.66
KCNQ3O43525 MSRA-203ENST00000441698 788 ntTSL 2 BASIC19.15■□□□□ 0.66
KCNQ3O43525 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC19.15■□□□□ 0.66
KCNQ3O43525 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.15■□□□□ 0.66
KCNQ3O43525 ALG3P1-201ENST00000508806 1114 ntBASIC19.15■□□□□ 0.66
KCNQ3O43525 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC19.15■□□□□ 0.66
KCNQ3O43525 AC009779.1-201ENST00000551138 283 ntBASIC19.15■□□□□ 0.66
KCNQ3O43525 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC19.15■□□□□ 0.66
KCNQ3O43525 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC19.15■□□□□ 0.66
KCNQ3O43525 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC19.15■□□□□ 0.66
KCNQ3O43525 MIR6720-201ENST00000611664 98 ntBASIC19.15■□□□□ 0.66
KCNQ3O43525 RPL35-206ENST00000629845 340 ntTSL 5 BASIC19.15■□□□□ 0.66
KCNQ3O43525 SF1-209ENST00000433274 2317 ntTSL 2 BASIC19.15■□□□□ 0.66
KCNQ3O43525 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
KCNQ3O43525 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
KCNQ3O43525 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms