Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 NOD1-201ENST00000222823 4499 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 NME2-201ENST00000393183 568 ntTSL 2 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 FAM8A3P-201ENST00000427218 844 ntBASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 AC103564.2-201ENST00000432853 1299 ntBASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 ECEL1P2-202ENST00000465689 757 ntBASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 LINC01238-205ENST00000567549 1107 ntBASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 STK25P1-201ENST00000585406 838 ntBASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 EGR3-201ENST00000317216 4336 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 AC092127.1-201ENST00000567093 3455 ntBASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 FBN2-201ENST00000262464 10724 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 ANKRD34B-201ENST00000338682 3938 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 AL512652.2-201ENST00000625156 1716 ntBASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHKB-CPT1BH3BT56 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
CHKB-CPT1BH3BT56 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC8.34□□□□□ -1.08
CHKB-CPT1BH3BT56 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.08
CHKB-CPT1BH3BT56 NWD1-204ENST00000524140 7641 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
CHKB-CPT1BH3BT56 AC015818.8-201ENST00000587907 1519 ntBASIC8.34□□□□□ -1.08
CHKB-CPT1BH3BT56 DIP2A-202ENST00000417564 6967 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.08
CHKB-CPT1BH3BT56 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
CHKB-CPT1BH3BT56 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 PRKACB-206ENST00000370689 4513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 PCDHGA2-202ENST00000528330 4543 ntAPPRIS ALT2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 TUBGCP2-201ENST00000252936 3885 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 AC097374.2-201ENST00000618617 1306 ntBASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 PCDHGB4-202ENST00000615384 4725 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms