Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 AC092862.1-201ENST00000541534 533 ntBASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 DUT-207ENST00000559416 635 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 PYY2-201ENST00000315776 282 ntBASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 RN7SL665P-201ENST00000578793 300 ntBASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 TRMT112P3-201ENST00000580149 358 ntBASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 APOC1-209ENST00000592885 562 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 AL160191.2-201ENST00000603975 601 ntBASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM88BA6NKF7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TMEM88BA6NKF7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.14■□□□□ 0.34
TMEM88BA6NKF7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
TMEM88BA6NKF7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
TMEM88BA6NKF7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TMEM88BA6NKF7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
TMEM88BA6NKF7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM88BA6NKF7 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM88BA6NKF7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM88BA6NKF7 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM88BA6NKF7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM88BA6NKF7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM88BA6NKF7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM88BA6NKF7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM88BA6NKF7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM88BA6NKF7 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM88BA6NKF7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TMEM88BA6NKF7 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM88BA6NKF7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM88BA6NKF7 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM88BA6NKF7 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM88BA6NKF7 MIR645-201ENST00000385283 94 ntBASIC17.14■□□□□ 0.33
TMEM88BA6NKF7 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms