Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 CICP23-201ENST00000605013 2741 ntBASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 TMCO5B-205ENST00000530020 894 ntBASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 LINC01783-202ENST00000614408 828 ntBASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 BX284668.2-205ENST00000619677 828 ntBASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHANK2Q9UPX8 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 AL583805.1-201ENST00000391389 531 ntBASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 DNAJB1P1-201ENST00000429417 1024 ntBASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 AC078991.1-201ENST00000437297 610 ntBASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 FTH1P22-201ENST00000456305 520 ntBASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 GMFG-209ENST00000600322 622 ntTSL 5 BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 AC022532.1-201ENST00000624563 1728 ntBASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHANK2Q9UPX8 RPSAP15-201ENST00000448168 861 ntBASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 AC130709.1-201ENST00000484779 1212 ntBASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 ORAOV1P1-201ENST00000503108 395 ntBASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 AC008723.1-201ENST00000506922 207 ntBASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 AC124068.2-201ENST00000569473 1109 ntBASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 AC009145.4-201ENST00000625119 1294 ntBASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 AC025271.4-201ENST00000621477 1726 ntBASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms