Protein–RNA interactions for Protein: Q9UNN4

GTF2A1L, TFIIA-alpha and beta-like factor, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1LQ9UNN4 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 KRT8P12-202ENST00000472924 1397 ntBASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 HIST3H2BA-201ENST00000436555 524 ntBASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 SPDYE14P-201ENST00000442619 822 ntBASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 SLED1-202ENST00000512051 380 ntBASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 AP000344.2-201ENST00000512987 629 ntBASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 AC093520.2-201ENST00000561830 333 ntBASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 MIR6069-201ENST00000620069 79 ntBASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 ACE3P-201ENST00000423435 1973 ntBASIC13.62□□□□□ -0.23
GTF2A1LQ9UNN4 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 CETN4P-206ENST00000642099 2168 ntBASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
GTF2A1LQ9UNN4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms