Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 AL355864.2-201ENST00000447420 863 ntBASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 FTH1P14-201ENST00000482930 551 ntBASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 AC244669.2-201ENST00000612320 853 ntBASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 AC012645.4-201ENST00000610691 1061 ntBASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 AC138466.3-201ENST00000619983 221 ntBASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 AC132938.4-201ENST00000623835 848 ntBASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
BLOC1S4Q9NUP1 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 SALL4P5-201ENST00000419001 1760 ntBASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BLOC1S4Q9NUP1 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms