Protein–RNA interactions for Protein: Q9NQC8

IFT46, Intraflagellar transport protein 46 homolog, humanhuman

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46Q9NQC8 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 AC093909.1-201ENST00000504731 1122 ntBASIC13.17□□□□□ -0.3
IFT46Q9NQC8 RNA5SP415-201ENST00000517246 115 ntBASIC13.17□□□□□ -0.3
IFT46Q9NQC8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 AC012313.10-201ENST00000623509 926 ntBASIC13.17□□□□□ -0.3
IFT46Q9NQC8 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 FOXO1B-201ENST00000504678 1527 ntBASIC13.17□□□□□ -0.3
IFT46Q9NQC8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT46Q9NQC8 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 AC113367.3-201ENST00000508316 1912 ntBASIC13.16□□□□□ -0.3
IFT46Q9NQC8 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 FAM220BP-201ENST00000377689 816 ntBASIC13.16□□□□□ -0.3
IFT46Q9NQC8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 AC136604.1-201ENST00000418535 575 ntBASIC13.16□□□□□ -0.3
IFT46Q9NQC8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 AC027307.2-201ENST00000591252 911 ntBASIC13.16□□□□□ -0.3
IFT46Q9NQC8 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 MIR7706-201ENST00000613747 67 ntBASIC13.16□□□□□ -0.3
IFT46Q9NQC8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 REXO1L1P-201ENST00000379010 6598 ntBASIC13.16□□□□□ -0.3
IFT46Q9NQC8 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.16□□□□□ -0.3
IFT46Q9NQC8 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms