Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.03■□□□□ 0.16
CD248Q9HCU0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.03■□□□□ 0.16
CD248Q9HCU0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.03■□□□□ 0.16
CD248Q9HCU0 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CD248Q9HCU0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.03■□□□□ 0.16
CD248Q9HCU0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.03■□□□□ 0.16
CD248Q9HCU0 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.03■□□□□ 0.16
CD248Q9HCU0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CD248Q9HCU0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.03■□□□□ 0.16
CD248Q9HCU0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 CR383656.2-201ENST00000548656 2254 ntBASIC16.03■□□□□ 0.16
CD248Q9HCU0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CD248Q9HCU0 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.03■□□□□ 0.16
CD248Q9HCU0 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.03■□□□□ 0.16
CD248Q9HCU0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CD248Q9HCU0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.03■□□□□ 0.16
CD248Q9HCU0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 AL356585.2-201ENST00000625078 2396 ntBASIC16.02■□□□□ 0.16
CD248Q9HCU0 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD248Q9HCU0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD248Q9HCU0 AC099521.3-201ENST00000624251 2938 ntBASIC16.02■□□□□ 0.16
CD248Q9HCU0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CD248Q9HCU0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD248Q9HCU0 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC16.02■□□□□ 0.16
CD248Q9HCU0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD248Q9HCU0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.16
CD248Q9HCU0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
CD248Q9HCU0 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CD248Q9HCU0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CD248Q9HCU0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CD248Q9HCU0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD248Q9HCU0 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.02■□□□□ 0.16
CD248Q9HCU0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD248Q9HCU0 AC022494.1-201ENST00000466044 728 ntBASIC16.02■□□□□ 0.16
CD248Q9HCU0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.02■□□□□ 0.16
CD248Q9HCU0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.02■□□□□ 0.16
CD248Q9HCU0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CD248Q9HCU0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.02■□□□□ 0.16
CD248Q9HCU0 AC036164.1-201ENST00000570544 333 ntBASIC16.02■□□□□ 0.16
CD248Q9HCU0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.02■□□□□ 0.16
CD248Q9HCU0 BTNL10-201ENST00000595971 695 ntBASIC16.02■□□□□ 0.16
CD248Q9HCU0 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CD248Q9HCU0 COX11-210ENST00000639671 696 ntBASIC16.02■□□□□ 0.16
CD248Q9HCU0 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD248Q9HCU0 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD248Q9HCU0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD248Q9HCU0 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD248Q9HCU0 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.02■□□□□ 0.15
CD248Q9HCU0 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CD248Q9HCU0 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD248Q9HCU0 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD248Q9HCU0 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC16.02■□□□□ 0.15
CD248Q9HCU0 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CD248Q9HCU0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.02■□□□□ 0.15
CD248Q9HCU0 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CD248Q9HCU0 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
CD248Q9HCU0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD248Q9HCU0 AC069224.1-201ENST00000566372 1715 ntBASIC16.02■□□□□ 0.15
CD248Q9HCU0 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD248Q9HCU0 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD248Q9HCU0 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CD248Q9HCU0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD248Q9HCU0 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
CD248Q9HCU0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD248Q9HCU0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.01■□□□□ 0.15
CD248Q9HCU0 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.01■□□□□ 0.15
CD248Q9HCU0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.01■□□□□ 0.15
CD248Q9HCU0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.01■□□□□ 0.15
CD248Q9HCU0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.01■□□□□ 0.15
CD248Q9HCU0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC16.01■□□□□ 0.15
CD248Q9HCU0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.01■□□□□ 0.15
CD248Q9HCU0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CD248Q9HCU0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.01■□□□□ 0.15
CD248Q9HCU0 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.01■□□□□ 0.15
CD248Q9HCU0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.01■□□□□ 0.15
CD248Q9HCU0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.01■□□□□ 0.15
CD248Q9HCU0 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.01■□□□□ 0.15
CD248Q9HCU0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms