Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 MST1P2-201ENST00000457982 2291 ntBASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 AL080243.2-201ENST00000418783 582 ntBASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 AL589739.1-201ENST00000607720 493 ntBASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AMBRA1Q9C0C7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 RPL13P2-201ENST00000440687 659 ntBASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 AC069120.2-201ENST00000524091 540 ntBASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 AL033527.5-202ENST00000641632 1098 ntBASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AMBRA1Q9C0C7 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms