Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S1Q92572 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.4□□□□□ -0.26
AP3S1Q92572 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S1Q92572 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S1Q92572 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S1Q92572 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.4□□□□□ -0.26
AP3S1Q92572 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S1Q92572 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S1Q92572 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.4□□□□□ -0.26
AP3S1Q92572 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.4□□□□□ -0.26
AP3S1Q92572 RPS2P1-201ENST00000434010 821 ntBASIC13.4□□□□□ -0.26
AP3S1Q92572 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.4□□□□□ -0.26
AP3S1Q92572 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
AP3S1Q92572 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.4□□□□□ -0.26
AP3S1Q92572 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.4□□□□□ -0.26
AP3S1Q92572 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.4□□□□□ -0.26
AP3S1Q92572 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
AP3S1Q92572 AC092119.3-201ENST00000612618 583 ntBASIC13.4□□□□□ -0.26
AP3S1Q92572 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.4□□□□□ -0.26
AP3S1Q92572 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S1Q92572 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S1Q92572 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
AP3S1Q92572 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.4□□□□□ -0.26
AP3S1Q92572 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
AP3S1Q92572 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
AP3S1Q92572 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.4□□□□□ -0.26
AP3S1Q92572 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.4□□□□□ -0.26
AP3S1Q92572 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S1Q92572 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
AP3S1Q92572 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S1Q92572 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S1Q92572 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
AP3S1Q92572 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
AP3S1Q92572 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
AP3S1Q92572 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.39□□□□□ -0.27
AP3S1Q92572 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.39□□□□□ -0.27
AP3S1Q92572 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
AP3S1Q92572 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.39□□□□□ -0.27
AP3S1Q92572 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.39□□□□□ -0.27
AP3S1Q92572 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
AP3S1Q92572 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.39□□□□□ -0.27
AP3S1Q92572 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
AP3S1Q92572 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.39□□□□□ -0.27
AP3S1Q92572 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
AP3S1Q92572 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.39□□□□□ -0.27
AP3S1Q92572 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.39□□□□□ -0.27
AP3S1Q92572 ATP5G2P1-201ENST00000433580 426 ntBASIC13.39□□□□□ -0.27
AP3S1Q92572 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.39□□□□□ -0.27
AP3S1Q92572 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
AP3S1Q92572 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
AP3S1Q92572 RNA5SP410-201ENST00000516285 106 ntBASIC13.39□□□□□ -0.27
AP3S1Q92572 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.39□□□□□ -0.27
AP3S1Q92572 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.39□□□□□ -0.27
AP3S1Q92572 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
AP3S1Q92572 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
AP3S1Q92572 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
AP3S1Q92572 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.39□□□□□ -0.27
AP3S1Q92572 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.39□□□□□ -0.27
AP3S1Q92572 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.39□□□□□ -0.27
AP3S1Q92572 AL031008.1-201ENST00000619963 541 ntBASIC13.39□□□□□ -0.27
AP3S1Q92572 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
AP3S1Q92572 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
AP3S1Q92572 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.39□□□□□ -0.27
AP3S1Q92572 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.39□□□□□ -0.27
AP3S1Q92572 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
AP3S1Q92572 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.39□□□□□ -0.27
AP3S1Q92572 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
AP3S1Q92572 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
AP3S1Q92572 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
AP3S1Q92572 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.39□□□□□ -0.27
AP3S1Q92572 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S1Q92572 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S1Q92572 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
AP3S1Q92572 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
AP3S1Q92572 AC092053.3-201ENST00000641308 4975 ntBASIC13.38□□□□□ -0.27
AP3S1Q92572 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
AP3S1Q92572 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms