Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 AC148477.4-201ENST00000613430 1793 ntBASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.3■□□□□ 0.36
U2AF1L4Q8WU68 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 AP002414.2-201ENST00000591780 3365 ntBASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 DPM3-202ENST00000368399 517 ntBASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 COX6A1P2-201ENST00000620597 330 ntBASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2AF1L4Q8WU68 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 AC013268.4-201ENST00000637413 2228 ntBASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms