Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 FTH1P14-201ENST00000482930 551 ntBASIC16.04■□□□□ 0.16
UBA3Q8TBC4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.04■□□□□ 0.16
UBA3Q8TBC4 GNRHR2-203ENST00000581100 1187 ntBASIC16.04■□□□□ 0.16
UBA3Q8TBC4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.04■□□□□ 0.16
UBA3Q8TBC4 AC004466.1-201ENST00000599515 1080 ntBASIC16.04■□□□□ 0.16
UBA3Q8TBC4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.04■□□□□ 0.16
UBA3Q8TBC4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBA3Q8TBC4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.04■□□□□ 0.16
UBA3Q8TBC4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBA3Q8TBC4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
UBA3Q8TBC4 CICP24-201ENST00000605464 2705 ntBASIC16.04■□□□□ 0.16
UBA3Q8TBC4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
UBA3Q8TBC4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
UBA3Q8TBC4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBA3Q8TBC4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
UBA3Q8TBC4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBA3Q8TBC4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBA3Q8TBC4 AC023824.1-201ENST00000562945 2975 ntBASIC16.04■□□□□ 0.16
UBA3Q8TBC4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBA3Q8TBC4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.04■□□□□ 0.16
UBA3Q8TBC4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBA3Q8TBC4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.04■□□□□ 0.16
UBA3Q8TBC4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.04■□□□□ 0.16
UBA3Q8TBC4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
UBA3Q8TBC4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 AL138709.1-201ENST00000614840 1693 ntBASIC16.03■□□□□ 0.16
UBA3Q8TBC4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 AL022328.1-201ENST00000610050 478 ntBASIC16.03■□□□□ 0.16
UBA3Q8TBC4 AC244669.2-201ENST00000612320 853 ntBASIC16.03■□□□□ 0.16
UBA3Q8TBC4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 AC023090.2-201ENST00000625182 2110 ntBASIC16.03■□□□□ 0.16
UBA3Q8TBC4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBA3Q8TBC4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 U91328.1-201ENST00000437528 223 ntBASIC16.02■□□□□ 0.16
UBA3Q8TBC4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.02■□□□□ 0.16
UBA3Q8TBC4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBA3Q8TBC4 AC007686.3-201ENST00000619017 3487 ntBASIC16.02■□□□□ 0.15
UBA3Q8TBC4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBA3Q8TBC4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms