Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 AL590640.2-201ENST00000457038 527 ntBASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 AP000812.2-201ENST00000538934 718 ntBASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 KRT90P-201ENST00000549264 1064 ntBASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.36□□□□□ -0.27
ZIC4Q8N9L1 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 AC006001.1-201ENST00000325130 474 ntBASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 ARSEP1-201ENST00000420443 635 ntBASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 AC078819.1-201ENST00000547454 765 ntBASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 AC012085.1-201ENST00000548270 765 ntBASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 RAB43P1-201ENST00000561790 589 ntBASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 ECM1P1-201ENST00000604092 1279 ntBASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 AC138466.3-201ENST00000619983 221 ntBASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 LINC02228-204ENST00000642115 2962 ntBASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 AC003102.2-201ENST00000589195 1469 ntBASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC4Q8N9L1 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms