Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APLFQ8IW19 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
APLFQ8IW19 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
APLFQ8IW19 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
APLFQ8IW19 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
APLFQ8IW19 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
APLFQ8IW19 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.15■□□□□ 0.02
APLFQ8IW19 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.15■□□□□ 0.02
APLFQ8IW19 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.14■□□□□ 0.01
APLFQ8IW19 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
APLFQ8IW19 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
APLFQ8IW19 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.14■□□□□ 0.01
APLFQ8IW19 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
APLFQ8IW19 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
APLFQ8IW19 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 DGCR5-201ENST00000399539 862 ntBASIC15.14■□□□□ 0.01
APLFQ8IW19 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.14■□□□□ 0.01
APLFQ8IW19 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 AC011495.1-201ENST00000498085 584 ntBASIC15.14■□□□□ 0.01
APLFQ8IW19 IGHV3-71-201ENST00000523324 359 ntBASIC15.14■□□□□ 0.01
APLFQ8IW19 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
APLFQ8IW19 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
APLFQ8IW19 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.14■□□□□ 0.01
APLFQ8IW19 AC020765.3-201ENST00000613051 740 ntBASIC15.14■□□□□ 0.01
APLFQ8IW19 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.14■□□□□ 0.01
APLFQ8IW19 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.14■□□□□ 0.01
APLFQ8IW19 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.14■□□□□ 0.01
APLFQ8IW19 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
APLFQ8IW19 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC15.14■□□□□ 0.01
APLFQ8IW19 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
APLFQ8IW19 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.14■□□□□ 0.01
APLFQ8IW19 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.14■□□□□ 0.01
APLFQ8IW19 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APLFQ8IW19 AC105250.1-201ENST00000509378 2057 ntBASIC15.13■□□□□ 0.01
APLFQ8IW19 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.13■□□□□ 0.01
APLFQ8IW19 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
APLFQ8IW19 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.13■□□□□ 0.01
APLFQ8IW19 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.13■□□□□ 0.01
APLFQ8IW19 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
APLFQ8IW19 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.13■□□□□ 0.01
APLFQ8IW19 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APLFQ8IW19 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APLFQ8IW19 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APLFQ8IW19 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APLFQ8IW19 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APLFQ8IW19 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APLFQ8IW19 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
APLFQ8IW19 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
APLFQ8IW19 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.13■□□□□ 0.01
APLFQ8IW19 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.13■□□□□ 0.01
APLFQ8IW19 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
APLFQ8IW19 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
APLFQ8IW19 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
APLFQ8IW19 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.13■□□□□ 0.01
APLFQ8IW19 AC114501.2-201ENST00000439631 535 ntBASIC15.13■□□□□ 0.01
APLFQ8IW19 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.13■□□□□ 0.01
APLFQ8IW19 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.13■□□□□ 0.01
APLFQ8IW19 GNAQP1-201ENST00000444815 1067 ntBASIC15.13■□□□□ 0.01
APLFQ8IW19 DOC2GP-202ENST00000514950 1163 ntBASIC15.13■□□□□ 0.01
APLFQ8IW19 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.13■□□□□ 0.01
APLFQ8IW19 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.13■□□□□ 0.01
APLFQ8IW19 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.13■□□□□ 0.01
APLFQ8IW19 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.13■□□□□ 0.01
APLFQ8IW19 AC026979.3-201ENST00000607315 403 ntBASIC15.13■□□□□ 0.01
APLFQ8IW19 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.13■□□□□ 0.01
APLFQ8IW19 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.13■□□□□ 0.01
APLFQ8IW19 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APLFQ8IW19 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.13■□□□□ 0.01
APLFQ8IW19 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APLFQ8IW19 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
APLFQ8IW19 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
APLFQ8IW19 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
APLFQ8IW19 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
APLFQ8IW19 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
APLFQ8IW19 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
APLFQ8IW19 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
APLFQ8IW19 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
APLFQ8IW19 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.13■□□□□ 0.01
APLFQ8IW19 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
APLFQ8IW19 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.13■□□□□ 0.01
APLFQ8IW19 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.12■□□□□ 0.01
APLFQ8IW19 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms