Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 RARRES2P9-201ENST00000565168 469 ntBASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 AP3S2-216ENST00000617003 1561 ntBASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 AC018442.1-201ENST00000421439 2061 ntBASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CRLF3Q8IUI8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 BCRP1-201ENST00000444246 691 ntBASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 AC140878.1-201ENST00000565277 250 ntBASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 MIR4453-201ENST00000584019 89 ntBASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 AC092364.2-202ENST00000597012 1073 ntBASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 AL096865.1-201ENST00000606796 927 ntBASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CRLF3Q8IUI8 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 AP001267.2-201ENST00000532619 2086 ntBASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 AC012508.2-201ENST00000567613 1472 ntBASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 TREML5P-201ENST00000421694 576 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms