Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC18.79■□□□□ 0.6
SMIM5Q71RC9 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC18.79■□□□□ 0.6
SMIM5Q71RC9 AC026471.1-201ENST00000564629 3026 ntBASIC18.79■□□□□ 0.6
SMIM5Q71RC9 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM5Q71RC9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM5Q71RC9 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.79■□□□□ 0.6
SMIM5Q71RC9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM5Q71RC9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM5Q71RC9 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SMIM5Q71RC9 TMBIM7P-202ENST00000641474 1516 ntBASIC18.79■□□□□ 0.6
SMIM5Q71RC9 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM5Q71RC9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 AL357563.1-201ENST00000404728 395 ntBASIC18.78■□□□□ 0.6
SMIM5Q71RC9 LYPLA2P1-203ENST00000447689 696 ntBASIC18.78■□□□□ 0.6
SMIM5Q71RC9 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 AC130709.1-201ENST00000484779 1212 ntBASIC18.78■□□□□ 0.6
SMIM5Q71RC9 CR383656.3-201ENST00000551315 183 ntBASIC18.78■□□□□ 0.6
SMIM5Q71RC9 AP000845.1-201ENST00000581677 2131 ntBASIC18.78■□□□□ 0.6
SMIM5Q71RC9 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.78■□□□□ 0.6
SMIM5Q71RC9 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 RNA5SP359-201ENST00000364838 113 ntBASIC18.77■□□□□ 0.6
SMIM5Q71RC9 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 ALG1L6P-201ENST00000515248 758 ntBASIC18.77■□□□□ 0.6
SMIM5Q71RC9 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 DNM1P51-201ENST00000558149 522 ntBASIC18.77■□□□□ 0.6
SMIM5Q71RC9 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 AC138466.4-201ENST00000623965 852 ntBASIC18.77■□□□□ 0.6
SMIM5Q71RC9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM5Q71RC9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMIM5Q71RC9 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.77■□□□□ 0.59
SMIM5Q71RC9 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.77■□□□□ 0.59
SMIM5Q71RC9 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMIM5Q71RC9 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMIM5Q71RC9 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
SMIM5Q71RC9 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 AC084018.2-201ENST00000613093 2607 ntBASIC18.76■□□□□ 0.59
SMIM5Q71RC9 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 KRT18P36-201ENST00000411618 1276 ntBASIC18.76■□□□□ 0.59
SMIM5Q71RC9 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 IDS-203ENST00000428056 1213 ntTSL 2 BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 AP003398.1-201ENST00000531124 318 ntBASIC18.76■□□□□ 0.59
SMIM5Q71RC9 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms