Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 AC005252.3-201ENST00000623855 2258 ntBASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 MIR770-201ENST00000390219 98 ntBASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 TARDBPP1-201ENST00000442013 1203 ntBASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 AC074044.1-201ENST00000609673 707 ntBASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 AL390754.1-201ENST00000619088 582 ntBASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 ST20-AS1-201ENST00000560255 4223 ntBASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.23□□□□□ -0.29
ATPAF1Q5TC12 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms