Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
LINC00242Q5T6M2 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC10.4□□□□□ -0.75
LINC00242Q5T6M2 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
LINC00242Q5T6M2 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC10.4□□□□□ -0.75
LINC00242Q5T6M2 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LINC00242Q5T6M2 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
LINC00242Q5T6M2 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC10.4□□□□□ -0.75
LINC00242Q5T6M2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
LINC00242Q5T6M2 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.75
LINC00242Q5T6M2 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC10.4□□□□□ -0.75
LINC00242Q5T6M2 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 AC018665.1-201ENST00000622927 1362 ntBASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 GOLGA8VP-201ENST00000559009 1798 ntBASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 AL354702.1-201ENST00000442006 1960 ntBASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 AL121723.1-201ENST00000445194 1519 ntBASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 MCCD1P2-201ENST00000423228 335 ntBASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 AC005237.2-201ENST00000434368 219 ntBASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 MTND6P24-201ENST00000440466 518 ntBASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 AC007967.4-201ENST00000614700 386 ntBASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 FUK-202ENST00000378912 3925 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00242Q5T6M2 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 AC089987.1-201ENST00000551654 2209 ntBASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 AL360270.3-201ENST00000609118 1348 ntBASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms