Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.15□□□□□ -0.14
CD47Q08722 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CD47Q08722 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 TCAF1P1-201ENST00000414990 2232 ntBASIC14.15□□□□□ -0.14
CD47Q08722 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.15□□□□□ -0.14
CD47Q08722 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.15□□□□□ -0.14
CD47Q08722 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.15□□□□□ -0.14
CD47Q08722 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.15□□□□□ -0.14
CD47Q08722 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
CD47Q08722 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.15□□□□□ -0.15
CD47Q08722 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 AC099521.3-201ENST00000624251 2938 ntBASIC14.14□□□□□ -0.15
CD47Q08722 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
CD47Q08722 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.14□□□□□ -0.15
CD47Q08722 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.14□□□□□ -0.15
CD47Q08722 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.14□□□□□ -0.15
CD47Q08722 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CD47Q08722 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.14□□□□□ -0.15
CD47Q08722 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.14□□□□□ -0.15
CD47Q08722 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CD47Q08722 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.14□□□□□ -0.15
CD47Q08722 KRT18P13-201ENST00000400056 1290 ntBASIC14.14□□□□□ -0.15
CD47Q08722 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.14□□□□□ -0.15
CD47Q08722 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CD47Q08722 AC254562.1-201ENST00000417586 456 ntBASIC14.14□□□□□ -0.15
CD47Q08722 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.14□□□□□ -0.15
CD47Q08722 GPS2P2-201ENST00000430745 888 ntBASIC14.14□□□□□ -0.15
CD47Q08722 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 SPDYE14P-201ENST00000442619 822 ntBASIC14.14□□□□□ -0.15
CD47Q08722 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.14□□□□□ -0.15
CD47Q08722 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.14□□□□□ -0.15
CD47Q08722 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.14□□□□□ -0.15
CD47Q08722 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.14□□□□□ -0.15
CD47Q08722 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.14□□□□□ -0.15
CD47Q08722 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CD47Q08722 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.14□□□□□ -0.15
CD47Q08722 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CD47Q08722 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CD47Q08722 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CD47Q08722 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD47Q08722 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.14□□□□□ -0.15
CD47Q08722 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CD47Q08722 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.13□□□□□ -0.15
CD47Q08722 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.13□□□□□ -0.15
CD47Q08722 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CD47Q08722 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.13□□□□□ -0.15
CD47Q08722 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.13□□□□□ -0.15
CD47Q08722 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.13□□□□□ -0.15
CD47Q08722 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CD47Q08722 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CD47Q08722 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CD47Q08722 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.13□□□□□ -0.15
CD47Q08722 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CD47Q08722 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CD47Q08722 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.13□□□□□ -0.15
CD47Q08722 AC136604.1-201ENST00000418535 575 ntBASIC14.13□□□□□ -0.15
CD47Q08722 SPDYE7P-202ENST00000420373 878 ntBASIC14.13□□□□□ -0.15
CD47Q08722 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms