Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.18■□□□□ 0.18
CDR2Q01850 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.17■□□□□ 0.18
CDR2Q01850 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDR2Q01850 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDR2Q01850 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.17■□□□□ 0.18
CDR2Q01850 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDR2Q01850 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.17■□□□□ 0.18
CDR2Q01850 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CDR2Q01850 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.17■□□□□ 0.18
CDR2Q01850 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDR2Q01850 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.17■□□□□ 0.18
CDR2Q01850 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.17■□□□□ 0.18
CDR2Q01850 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDR2Q01850 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDR2Q01850 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CDR2Q01850 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDR2Q01850 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.17■□□□□ 0.18
CDR2Q01850 AC087499.6-201ENST00000411576 835 ntBASIC16.17■□□□□ 0.18
CDR2Q01850 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.17■□□□□ 0.18
CDR2Q01850 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDR2Q01850 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.17■□□□□ 0.18
CDR2Q01850 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.17■□□□□ 0.18
CDR2Q01850 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.17■□□□□ 0.18
CDR2Q01850 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.17■□□□□ 0.18
CDR2Q01850 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.17■□□□□ 0.18
CDR2Q01850 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDR2Q01850 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.17■□□□□ 0.18
CDR2Q01850 CHCHD2P3-201ENST00000603038 451 ntBASIC16.17■□□□□ 0.18
CDR2Q01850 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.17■□□□□ 0.18
CDR2Q01850 AC008761.3-201ENST00000624803 892 ntBASIC16.17■□□□□ 0.18
CDR2Q01850 AC023090.2-201ENST00000625182 2110 ntBASIC16.17■□□□□ 0.18
CDR2Q01850 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.17■□□□□ 0.18
CDR2Q01850 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDR2Q01850 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDR2Q01850 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDR2Q01850 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CDR2Q01850 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.17■□□□□ 0.18
CDR2Q01850 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDR2Q01850 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDR2Q01850 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.17■□□□□ 0.18
CDR2Q01850 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDR2Q01850 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDR2Q01850 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CDR2Q01850 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDR2Q01850 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDR2Q01850 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.17■□□□□ 0.18
CDR2Q01850 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDR2Q01850 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.16■□□□□ 0.18
CDR2Q01850 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.16■□□□□ 0.18
CDR2Q01850 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.16■□□□□ 0.18
CDR2Q01850 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.16■□□□□ 0.18
CDR2Q01850 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CDR2Q01850 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CDR2Q01850 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.16■□□□□ 0.18
CDR2Q01850 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDR2Q01850 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.16■□□□□ 0.18
CDR2Q01850 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 SOCS2P1-201ENST00000417727 557 ntBASIC16.16■□□□□ 0.18
CDR2Q01850 BCRP1-201ENST00000444246 691 ntBASIC16.16■□□□□ 0.18
CDR2Q01850 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.16■□□□□ 0.18
CDR2Q01850 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CDR2Q01850 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 AP001582.1-201ENST00000525856 295 ntBASIC16.16■□□□□ 0.18
CDR2Q01850 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.16■□□□□ 0.18
CDR2Q01850 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.16■□□□□ 0.18
CDR2Q01850 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.16■□□□□ 0.18
CDR2Q01850 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.16■□□□□ 0.18
CDR2Q01850 LINC02560-201ENST00000596379 459 ntBASIC16.16■□□□□ 0.18
CDR2Q01850 AL096865.1-201ENST00000606796 927 ntBASIC16.16■□□□□ 0.18
CDR2Q01850 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDR2Q01850 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CDR2Q01850 KRT8P14-201ENST00000414254 1442 ntBASIC16.16■□□□□ 0.18
CDR2Q01850 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CDR2Q01850 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CDR2Q01850 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CDR2Q01850 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.16■□□□□ 0.18
CDR2Q01850 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDR2Q01850 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDR2Q01850 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDR2Q01850 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDR2Q01850 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms