Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.68□□□□□ -0.22
CDK5Q00535 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CDK5Q00535 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.68□□□□□ -0.22
CDK5Q00535 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.68□□□□□ -0.22
CDK5Q00535 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.68□□□□□ -0.22
CDK5Q00535 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.68□□□□□ -0.22
CDK5Q00535 AC069262.1-201ENST00000539058 672 ntBASIC13.68□□□□□ -0.22
CDK5Q00535 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.68□□□□□ -0.22
CDK5Q00535 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.68□□□□□ -0.22
CDK5Q00535 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.68□□□□□ -0.22
CDK5Q00535 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CDK5Q00535 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.68□□□□□ -0.22
CDK5Q00535 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.68□□□□□ -0.22
CDK5Q00535 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CDK5Q00535 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.68□□□□□ -0.22
CDK5Q00535 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CDK5Q00535 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.67□□□□□ -0.22
CDK5Q00535 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 AC093525.8-201ENST00000624099 1342 ntBASIC13.67□□□□□ -0.22
CDK5Q00535 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CDK5Q00535 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CDK5Q00535 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.67□□□□□ -0.22
CDK5Q00535 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CDK5Q00535 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.67□□□□□ -0.22
CDK5Q00535 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.67□□□□□ -0.22
CDK5Q00535 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.67□□□□□ -0.22
CDK5Q00535 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.67□□□□□ -0.22
CDK5Q00535 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.67□□□□□ -0.22
CDK5Q00535 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.67□□□□□ -0.22
CDK5Q00535 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.67□□□□□ -0.22
CDK5Q00535 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.67□□□□□ -0.22
CDK5Q00535 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.67□□□□□ -0.22
CDK5Q00535 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.67□□□□□ -0.22
CDK5Q00535 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.67□□□□□ -0.22
CDK5Q00535 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.67□□□□□ -0.22
CDK5Q00535 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.67□□□□□ -0.22
CDK5Q00535 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.67□□□□□ -0.22
CDK5Q00535 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.67□□□□□ -0.22
CDK5Q00535 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.67□□□□□ -0.22
CDK5Q00535 AL138828.2-201ENST00000615812 383 ntBASIC13.67□□□□□ -0.22
CDK5Q00535 SPDYE12P-201ENST00000618416 771 ntBASIC13.67□□□□□ -0.22
CDK5Q00535 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.67□□□□□ -0.22
CDK5Q00535 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CDK5Q00535 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.67□□□□□ -0.22
CDK5Q00535 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.67□□□□□ -0.22
CDK5Q00535 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.67□□□□□ -0.22
CDK5Q00535 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.67□□□□□ -0.22
CDK5Q00535 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CDK5Q00535 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.67□□□□□ -0.22
CDK5Q00535 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.67□□□□□ -0.22
CDK5Q00535 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.67□□□□□ -0.22
CDK5Q00535 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 AC090505.1-201ENST00000430515 1834 ntBASIC13.67□□□□□ -0.22
CDK5Q00535 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDK5Q00535 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.66□□□□□ -0.22
CDK5Q00535 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.66□□□□□ -0.22
CDK5Q00535 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.66□□□□□ -0.22
CDK5Q00535 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CDK5Q00535 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms