Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.87■□□□□ 0.13
IRX4P78413 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.87■□□□□ 0.13
IRX4P78413 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.87■□□□□ 0.13
IRX4P78413 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.87■□□□□ 0.13
IRX4P78413 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.87■□□□□ 0.13
IRX4P78413 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.87■□□□□ 0.13
IRX4P78413 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 RN7SL399P-201ENST00000471648 279 ntBASIC15.87■□□□□ 0.13
IRX4P78413 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.87■□□□□ 0.13
IRX4P78413 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.87■□□□□ 0.13
IRX4P78413 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.87■□□□□ 0.13
IRX4P78413 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.87■□□□□ 0.13
IRX4P78413 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.87■□□□□ 0.13
IRX4P78413 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.87■□□□□ 0.13
IRX4P78413 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.87■□□□□ 0.13
IRX4P78413 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.87■□□□□ 0.13
IRX4P78413 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
IRX4P78413 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
IRX4P78413 GRK6P1-201ENST00000400595 1711 ntBASIC15.87■□□□□ 0.13
IRX4P78413 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.87■□□□□ 0.13
IRX4P78413 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
IRX4P78413 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.87■□□□□ 0.13
IRX4P78413 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.87■□□□□ 0.13
IRX4P78413 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 AC020907.1-201ENST00000616460 1350 ntBASIC15.87■□□□□ 0.13
IRX4P78413 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.87■□□□□ 0.13
IRX4P78413 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.87■□□□□ 0.13
IRX4P78413 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IRX4P78413 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.86■□□□□ 0.13
IRX4P78413 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IRX4P78413 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IRX4P78413 KRT8P22-201ENST00000562317 1415 ntBASIC15.86■□□□□ 0.13
IRX4P78413 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.86■□□□□ 0.13
IRX4P78413 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IRX4P78413 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
IRX4P78413 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.86■□□□□ 0.13
IRX4P78413 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
IRX4P78413 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
IRX4P78413 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.86■□□□□ 0.13
IRX4P78413 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
IRX4P78413 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IRX4P78413 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IRX4P78413 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IRX4P78413 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
IRX4P78413 AC099336.1-201ENST00000417053 1171 ntBASIC15.86■□□□□ 0.13
IRX4P78413 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.86■□□□□ 0.13
IRX4P78413 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.86■□□□□ 0.13
IRX4P78413 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.86■□□□□ 0.13
IRX4P78413 AL355994.2-201ENST00000447882 704 ntBASIC15.86■□□□□ 0.13
IRX4P78413 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.86■□□□□ 0.13
IRX4P78413 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.86■□□□□ 0.13
IRX4P78413 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.86■□□□□ 0.13
IRX4P78413 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.86■□□□□ 0.13
IRX4P78413 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.86■□□□□ 0.13
IRX4P78413 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.86■□□□□ 0.13
IRX4P78413 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.86■□□□□ 0.13
IRX4P78413 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.86■□□□□ 0.13
IRX4P78413 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.86■□□□□ 0.13
IRX4P78413 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IRX4P78413 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
IRX4P78413 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IRX4P78413 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.86■□□□□ 0.13
IRX4P78413 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.86■□□□□ 0.13
IRX4P78413 TUBB1P2-201ENST00000422712 1306 ntBASIC15.86■□□□□ 0.13
IRX4P78413 TUBB1P1-201ENST00000503144 1300 ntBASIC15.86■□□□□ 0.13
IRX4P78413 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.86■□□□□ 0.13
IRX4P78413 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IRX4P78413 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IRX4P78413 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
IRX4P78413 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
IRX4P78413 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IRX4P78413 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
IRX4P78413 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
IRX4P78413 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.85■□□□□ 0.13
IRX4P78413 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IRX4P78413 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
IRX4P78413 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
IRX4P78413 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.85■□□□□ 0.13
IRX4P78413 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.85■□□□□ 0.13
IRX4P78413 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IRX4P78413 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
IRX4P78413 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IRX4P78413 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.85■□□□□ 0.13
IRX4P78413 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms