Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLCN2P51788 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
CLCN2P51788 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.77□□□□□ -0.05
CLCN2P51788 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLCN2P51788 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.76□□□□□ -0.05
CLCN2P51788 AC152010.1-201ENST00000415779 2006 ntBASIC14.76□□□□□ -0.05
CLCN2P51788 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.76□□□□□ -0.05
CLCN2P51788 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.76□□□□□ -0.05
CLCN2P51788 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CLCN2P51788 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
CLCN2P51788 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.76□□□□□ -0.05
CLCN2P51788 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CLCN2P51788 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.76□□□□□ -0.05
CLCN2P51788 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.76□□□□□ -0.05
CLCN2P51788 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.76□□□□□ -0.05
CLCN2P51788 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.76□□□□□ -0.05
CLCN2P51788 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.76□□□□□ -0.05
CLCN2P51788 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.76□□□□□ -0.05
CLCN2P51788 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 AC190387.1-201ENST00000551683 408 ntBASIC14.76□□□□□ -0.05
CLCN2P51788 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.76□□□□□ -0.05
CLCN2P51788 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.76□□□□□ -0.05
CLCN2P51788 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CLCN2P51788 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.76□□□□□ -0.05
CLCN2P51788 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.76□□□□□ -0.05
CLCN2P51788 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.76□□□□□ -0.05
CLCN2P51788 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.76□□□□□ -0.05
CLCN2P51788 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CLCN2P51788 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CLCN2P51788 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CLCN2P51788 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCN2P51788 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCN2P51788 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCN2P51788 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CLCN2P51788 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.75□□□□□ -0.05
CLCN2P51788 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLCN2P51788 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.75□□□□□ -0.05
CLCN2P51788 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCN2P51788 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCN2P51788 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCN2P51788 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCN2P51788 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.75□□□□□ -0.05
CLCN2P51788 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.75□□□□□ -0.05
CLCN2P51788 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CLCN2P51788 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CLCN2P51788 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.75□□□□□ -0.05
CLCN2P51788 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
CLCN2P51788 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCN2P51788 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCN2P51788 SPDYE19P-201ENST00000338590 713 ntBASIC14.75□□□□□ -0.05
CLCN2P51788 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCN2P51788 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLCN2P51788 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLCN2P51788 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.75□□□□□ -0.05
CLCN2P51788 COX20P2-201ENST00000452636 358 ntBASIC14.75□□□□□ -0.05
CLCN2P51788 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.75□□□□□ -0.05
CLCN2P51788 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.75□□□□□ -0.05
CLCN2P51788 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.75□□□□□ -0.05
CLCN2P51788 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.75□□□□□ -0.05
CLCN2P51788 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.75□□□□□ -0.05
CLCN2P51788 AC027307.3-201ENST00000594262 1100 ntBASIC14.75□□□□□ -0.05
CLCN2P51788 SRD5A3P1-201ENST00000603021 949 ntBASIC14.75□□□□□ -0.05
CLCN2P51788 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCN2P51788 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLCN2P51788 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CLCN2P51788 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCN2P51788 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCN2P51788 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLCN2P51788 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CLCN2P51788 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLCN2P51788 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CLCN2P51788 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.75□□□□□ -0.05
CLCN2P51788 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.75□□□□□ -0.05
CLCN2P51788 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLCN2P51788 LINC01230-201ENST00000625222 3017 ntBASIC14.75□□□□□ -0.05
CLCN2P51788 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms