Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFSF9P41273 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TNFSF9P41273 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFSF9P41273 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF9P41273 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.32■□□□□ 0.2
TNFSF9P41273 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF9P41273 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF9P41273 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF9P41273 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF9P41273 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF9P41273 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TNFSF9P41273 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF9P41273 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF9P41273 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF9P41273 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF9P41273 FAM21FP-201ENST00000426241 1131 ntBASIC16.32■□□□□ 0.2
TNFSF9P41273 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.32■□□□□ 0.2
TNFSF9P41273 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFSF9P41273 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
TNFSF9P41273 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.32■□□□□ 0.2
TNFSF9P41273 DUX4L45-201ENST00000566406 1057 ntBASIC16.32■□□□□ 0.2
TNFSF9P41273 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF9P41273 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF9P41273 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFSF9P41273 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.32■□□□□ 0.2
TNFSF9P41273 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF9P41273 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TNFSF9P41273 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.32■□□□□ 0.2
TNFSF9P41273 TNRC18P2-201ENST00000417666 2714 ntBASIC16.32■□□□□ 0.2
TNFSF9P41273 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TNFSF9P41273 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFSF9P41273 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TNFSF9P41273 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.31■□□□□ 0.2
TNFSF9P41273 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.31■□□□□ 0.2
TNFSF9P41273 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TNFSF9P41273 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TNFSF9P41273 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.31■□□□□ 0.2
TNFSF9P41273 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.31■□□□□ 0.2
TNFSF9P41273 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.31■□□□□ 0.2
TNFSF9P41273 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFSF9P41273 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.31■□□□□ 0.2
TNFSF9P41273 AC010328.2-201ENST00000597698 1111 ntBASIC16.31■□□□□ 0.2
TNFSF9P41273 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 AC138696.2-201ENST00000607376 223 ntBASIC16.31■□□□□ 0.2
TNFSF9P41273 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TNFSF9P41273 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF9P41273 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF9P41273 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFSF9P41273 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFSF9P41273 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF9P41273 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TNFSF9P41273 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFSF9P41273 AC003102.2-201ENST00000589195 1469 ntBASIC16.3■□□□□ 0.2
TNFSF9P41273 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFSF9P41273 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF9P41273 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF9P41273 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF9P41273 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF9P41273 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.3■□□□□ 0.2
TNFSF9P41273 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF9P41273 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFSF9P41273 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF9P41273 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFSF9P41273 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TNFSF9P41273 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF9P41273 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF9P41273 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFSF9P41273 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.3■□□□□ 0.2
TNFSF9P41273 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.3■□□□□ 0.2
TNFSF9P41273 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.3■□□□□ 0.2
TNFSF9P41273 MIR4683-201ENST00000579659 81 ntBASIC16.3■□□□□ 0.2
TNFSF9P41273 RN7SL713P-201ENST00000582127 302 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms