Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 ENPP7P5-201ENST00000541031 1031 ntBASIC14.57□□□□□ -0.08
PTX3P26022 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.57□□□□□ -0.08
PTX3P26022 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.57□□□□□ -0.08
PTX3P26022 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.57□□□□□ -0.08
PTX3P26022 AL359711.2-201ENST00000563105 872 ntBASIC14.57□□□□□ -0.08
PTX3P26022 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.57□□□□□ -0.08
PTX3P26022 AC124283.3-201ENST00000570869 594 ntBASIC14.57□□□□□ -0.08
PTX3P26022 AL355385.1-201ENST00000606123 409 ntBASIC14.57□□□□□ -0.08
PTX3P26022 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.57□□□□□ -0.08
PTX3P26022 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.57□□□□□ -0.08
PTX3P26022 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PTX3P26022 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTX3P26022 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTX3P26022 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PTX3P26022 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
PTX3P26022 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTX3P26022 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.57□□□□□ -0.08
PTX3P26022 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PTX3P26022 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTX3P26022 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
PTX3P26022 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.57□□□□□ -0.08
PTX3P26022 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTX3P26022 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PTX3P26022 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.56□□□□□ -0.08
PTX3P26022 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.56□□□□□ -0.08
PTX3P26022 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.56□□□□□ -0.08
PTX3P26022 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.56□□□□□ -0.08
PTX3P26022 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.56□□□□□ -0.08
PTX3P26022 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
PTX3P26022 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.56□□□□□ -0.08
PTX3P26022 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
PTX3P26022 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
PTX3P26022 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.56□□□□□ -0.08
PTX3P26022 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 MIR661-201ENST00000384842 89 ntBASIC14.56□□□□□ -0.08
PTX3P26022 AC236430.1-201ENST00000402231 743 ntBASIC14.56□□□□□ -0.08
PTX3P26022 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.56□□□□□ -0.08
PTX3P26022 AC098850.1-201ENST00000419919 790 ntBASIC14.56□□□□□ -0.08
PTX3P26022 HLA-K-203ENST00000430151 1046 ntBASIC14.56□□□□□ -0.08
PTX3P26022 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.56□□□□□ -0.08
PTX3P26022 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.56□□□□□ -0.08
PTX3P26022 MIR4745-201ENST00000577608 62 ntBASIC14.56□□□□□ -0.08
PTX3P26022 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.56□□□□□ -0.08
PTX3P26022 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.56□□□□□ -0.08
PTX3P26022 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.56□□□□□ -0.08
PTX3P26022 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
PTX3P26022 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.56□□□□□ -0.08
PTX3P26022 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.56□□□□□ -0.08
PTX3P26022 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.56□□□□□ -0.08
PTX3P26022 LINC00552-201ENST00000625151 2579 ntBASIC14.56□□□□□ -0.08
PTX3P26022 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
PTX3P26022 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PTX3P26022 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTX3P26022 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PTX3P26022 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PTX3P26022 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
PTX3P26022 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.55□□□□□ -0.08
PTX3P26022 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.55□□□□□ -0.08
PTX3P26022 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
PTX3P26022 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTX3P26022 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTX3P26022 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTX3P26022 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
PTX3P26022 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.55□□□□□ -0.08
PTX3P26022 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.55□□□□□ -0.08
PTX3P26022 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTX3P26022 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTX3P26022 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTX3P26022 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTX3P26022 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PTX3P26022 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTX3P26022 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.55□□□□□ -0.08
PTX3P26022 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTX3P26022 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTX3P26022 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
PTX3P26022 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
PTX3P26022 AL139094.1-201ENST00000405549 1188 ntBASIC14.55□□□□□ -0.08
PTX3P26022 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.55□□□□□ -0.08
PTX3P26022 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms