Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
NR4A1P22736 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR4A1P22736 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR4A1P22736 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR4A1P22736 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR4A1P22736 AC004899.2-201ENST00000622993 3860 ntBASIC14.2□□□□□ -0.14
NR4A1P22736 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NR4A1P22736 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NR4A1P22736 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NR4A1P22736 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NR4A1P22736 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NR4A1P22736 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NR4A1P22736 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR4A1P22736 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR4A1P22736 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.2□□□□□ -0.14
NR4A1P22736 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.2□□□□□ -0.14
NR4A1P22736 FAM58DP-201ENST00000428076 619 ntBASIC14.2□□□□□ -0.14
NR4A1P22736 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.2□□□□□ -0.14
NR4A1P22736 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.2□□□□□ -0.14
NR4A1P22736 METTL21AP1-201ENST00000438852 635 ntBASIC14.2□□□□□ -0.14
NR4A1P22736 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.2□□□□□ -0.14
NR4A1P22736 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NR4A1P22736 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR4A1P22736 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR4A1P22736 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.2□□□□□ -0.14
NR4A1P22736 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NR4A1P22736 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR4A1P22736 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
NR4A1P22736 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.2□□□□□ -0.14
NR4A1P22736 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR4A1P22736 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR4A1P22736 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR4A1P22736 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
NR4A1P22736 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR4A1P22736 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR4A1P22736 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.2□□□□□ -0.14
NR4A1P22736 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.2□□□□□ -0.14
NR4A1P22736 AC092135.3-201ENST00000624151 1846 ntBASIC14.2□□□□□ -0.14
NR4A1P22736 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR4A1P22736 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR4A1P22736 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.2□□□□□ -0.14
NR4A1P22736 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR4A1P22736 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.19□□□□□ -0.14
NR4A1P22736 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
NR4A1P22736 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NR4A1P22736 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NR4A1P22736 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NR4A1P22736 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 AL139400.1-201ENST00000366220 510 ntBASIC14.19□□□□□ -0.14
NR4A1P22736 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NR4A1P22736 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.19□□□□□ -0.14
NR4A1P22736 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.19□□□□□ -0.14
NR4A1P22736 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.19□□□□□ -0.14
NR4A1P22736 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.19□□□□□ -0.14
NR4A1P22736 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.19□□□□□ -0.14
NR4A1P22736 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.19□□□□□ -0.14
NR4A1P22736 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 SLC25A39P2-201ENST00000537614 270 ntBASIC14.19□□□□□ -0.14
NR4A1P22736 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NR4A1P22736 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.19□□□□□ -0.14
NR4A1P22736 AC004449.1-201ENST00000564240 433 ntBASIC14.19□□□□□ -0.14
NR4A1P22736 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.19□□□□□ -0.14
NR4A1P22736 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.19□□□□□ -0.14
NR4A1P22736 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.19□□□□□ -0.14
NR4A1P22736 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.19□□□□□ -0.14
NR4A1P22736 LINC00628-201ENST00000628516 1289 ntBASIC14.19□□□□□ -0.14
NR4A1P22736 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NR4A1P22736 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.19□□□□□ -0.14
NR4A1P22736 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 AC019294.4-201ENST00000561777 2905 ntBASIC14.19□□□□□ -0.14
NR4A1P22736 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NR4A1P22736 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.19□□□□□ -0.14
NR4A1P22736 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NR4A1P22736 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.19□□□□□ -0.14
NR4A1P22736 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.19□□□□□ -0.14
NR4A1P22736 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR4A1P22736 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.19□□□□□ -0.14
NR4A1P22736 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms